RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 YWHAQP27348 245 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 ADORA2BP29275 332 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 CCR3P51677 355 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 MAP3K7CLP57077 242 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 UBE2HP62256 183 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 STIM1Q13586 685 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 LRRC32Q14392 662 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 SPEM1Q8N4L4 309 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 SH3RF2Q8TEC5 729 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 OSCP1Q8WVF1 389 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 NELFBQ8WX92 580 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
HMGN3-202ENST00000344726 FBXO32Q969P5 355 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 NT5C1AQ9BXI3 368 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 EPC1Q9H2F5 836 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 LINC00597Q9H2U6 94 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 POLR3BQ9NW08 1133 aaPredicted RBP15.29■□□□□ 0.04
HMGN3-202ENST00000344726 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
HMGN3-202ENST00000344726 ARHGAP26Q9UNA1 814 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 COQ4Q9Y3A0 265 aa15.29■□□□□ 0.04
HMGN3-202ENST00000344726 FAM92AA1XBS5 289 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 HHLA1C9JL84 531 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 STX10O60499 249 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 RTN3O95197 1032 aaPredicted RBP15.28■□□□□ 0.04
HMGN3-202ENST00000344726 ABL1P00519 1130 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 TCF3P15923 654 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 GJA4P35212 333 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 CXCL12P48061 93 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 PPP3CCP48454 512 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 PGFP49763 221 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 PDGFRLQ15198 375 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 EML3Q32P44 896 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 ZNF394Q53GI3 561 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 TMEM196Q5HYL7 178 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 DGKKQ5KSL6 1271 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 CLEC20AQ6ZU45 233 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 GPRIN1Q7Z2K8 1008 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 CCDC150Q8NCX0 1101 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 ATRIPQ8WXE1 791 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 CYFIP2Q96F07 1278 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
HMGN3-202ENST00000344726 ECT2Q9H8V3 914 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 DUS2Q9NX74 493 aaKnown RBP15.28■□□□□ 0.04
HMGN3-202ENST00000344726 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
HMGN3-202ENST00000344726 CTNND2Q9UQB3 1225 aa15.28■□□□□ 0.04
HMGN3-202ENST00000344726 ANTXRLA6NF34 631 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 LEFTY2O00292 366 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.04
HMGN3-202ENST00000344726 SCAMP3O14828 347 aaKnown RBP15.27■□□□□ 0.04
HMGN3-202ENST00000344726 PAPSS2O95340 614 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-202ENST00000344726 EGFP01133 1207 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 FAM200BP0CF97 657 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 PFKLP17858 780 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 GALK1P51570 392 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 STX17P56962 302 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 SLC7A9P82251 487 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 SRSF5Q13243 272 aaKnown RBP15.27■□□□□ 0.04
HMGN3-202ENST00000344726 CAMK4Q16566 473 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 GAB4Q2WGN9 574 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 PPP1R26Q5T8A7 1209 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-202ENST00000344726 CC2D1AQ6P1N0 951 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-202ENST00000344726 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 CEP63Q96MT8 703 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 CISHQ9NSE2 258 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 GMIPQ9P107 970 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 SMG5Q9UPR3 1016 aaKnown RBP15.27■□□□□ 0.04
HMGN3-202ENST00000344726 CPQQ9Y646 472 aa15.27■□□□□ 0.04
HMGN3-202ENST00000344726 MYO18AQ92614 2054 aaKnown RBP15.26■□□□□ 0.03
HMGN3-202ENST00000344726 CHURC1-FNTBB4DL54 471 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 PPP1R2P41236 205 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 FNTBP49356 437 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 PDE6CP51160 858 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 RAD23BP54727 409 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 FOXR2Q6PJQ5 311 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 KIAA2013Q8IYS2 634 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 OVCA2Q8WZ82 227 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 RUBCNQ92622 972 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 ZFRQ96KR1 1074 aaKnown RBP15.26■□□□□ 0.03
HMGN3-202ENST00000344726 FAM126AQ9BYI3 521 aaPredicted RBP15.26■□□□□ 0.03
HMGN3-202ENST00000344726 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 COMMD8Q9NX08 183 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 SMPD4Q9NXE4 827 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 KIAA1468Q9P260 1216 aa15.26■□□□□ 0.03
HMGN3-202ENST00000344726 COCHO43405 550 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 IFNAR2P48551 515 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 FMO5P49326 533 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 PAK1Q13153 545 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 GSE1Q14687 1217 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 SYNPOQ8N3V7 929 aa15.25■□□□□ 0.03
HMGN3-202ENST00000344726 CPA6Q8N4T0 437 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms