RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ERLEC1Q96DZ1 483 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 RMDN3Q96TC7 470 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 MAN1C1Q9NR34 630 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 HEY2Q9UBP5 337 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 DCTN4Q9UJW0 460 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 NAGPAQ9UK23 515 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 ADAMTS6Q9UKP5 1117 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 ACTL7BQ9Y614 415 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 MAD1L1Q9Y6D9 718 aa12.35□□□□□ -0.43
RTN3-203ENST00000341307 TESPA1A2RU30 521 aaPredicted RBP12.34□□□□□ -0.43
RTN3-203ENST00000341307 NR1D2Q14995 579 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 PHKG1Q16816 387 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 MAP3K21Q5TCX8 1036 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 FASTKD5Q7L8L6 764 aaKnown RBP12.34□□□□□ -0.43
RTN3-203ENST00000341307 SIX5Q8N196 739 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 MARVELD2Q8N4S9 558 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 TTC39CQ8N584 583 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 CCDC68Q9H2F9 335 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 PARVBQ9HBI1 364 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 AGO4Q9HCK5 861 aaKnown RBP12.34□□□□□ -0.43
RTN3-203ENST00000341307 FBXO6Q9NRD1 293 aaPredicted RBP12.34□□□□□ -0.43
RTN3-203ENST00000341307 RNF146Q9NTX7 359 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 ABT1Q9ULW3 272 aaKnown RBP12.34□□□□□ -0.43
RTN3-203ENST00000341307 ZMYM2Q9UBW7 1377 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 LOC105371267A0A1B0GV96 52 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 TCEA3O75764 348 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 FAM13AO94988 1023 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 ESRRAP11474 423 aaPredicted RBP12.34□□□□□ -0.43
RTN3-203ENST00000341307 TCEA1P23193 301 aaKnown RBP12.34□□□□□ -0.43
RTN3-203ENST00000341307 CPA2P48052 419 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 XIAPP98170 497 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 FSTL1Q12841 308 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 EPHA7Q15375 998 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 ASIC2Q16515 512 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 FXNQ16595 210 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 FYB2Q5VWT5 728 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 AADACL2Q6P093 401 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 MIER3Q7Z3K6 550 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 ZDHHC14Q8IZN3 488 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 RNF169Q8NCN4 708 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 SHKBP1Q8TBC3 707 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 S100A14Q9HCY8 104 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 SLC7A8Q9UHI5 535 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 PLA2G4CQ9UP65 541 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 SSX2IPQ9Y2D8 614 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 PCDHB2Q9Y5E7 798 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
RTN3-203ENST00000341307 ASTN1O14525 1302 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PODXLO00592 558 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ITM2AO43736 263 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 SORBS3O60504 671 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 KCNA2P16389 499 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 HOXD10P28358 340 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 CHKAP35790 457 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PPARGP37231 505 aaPredicted RBP12.33□□□□□ -0.44
RTN3-203ENST00000341307 GSSP48637 474 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 CASP4P49662 377 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
RTN3-203ENST00000341307 SPARCL1Q14515 664 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 KRT81Q14533 505 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 COG2Q14746 738 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 NIPAL1Q6NVV3 410 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PRUNE1Q86TP1 453 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 TRIM59Q8IWR1 403 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 SYCE1Q8N0S2 351 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ALLCQ8N6M5 410 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PRELID2Q8N945 189 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 EME1Q96AY2 570 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 SPATA17Q96L03 361 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 SLC39A3Q9BRY0 314 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 MKNK1Q9BUB5 465 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 SIAEQ9HAT2 523 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 AS3MTQ9HBK9 375 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 RSL24D1Q9UHA3 163 aaKnown RBP12.33□□□□□ -0.44
RTN3-203ENST00000341307 PCYOX1Q9UHG3 505 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 NENFQ9UMX5 172 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 UBIAD1Q9Y5Z9 338 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 COL11A1P12107 1806 aaPredicted RBP12.33□□□□□ -0.44
RTN3-203ENST00000341307 TMEM114B3SHH9 223 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 AKAP3O75969 853 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 C6orf222P0C671 652 aaPredicted RBP12.33□□□□□ -0.44
RTN3-203ENST00000341307 RBP3P10745 1247 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 UBL4AP11441 157 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ZNF12P17014 697 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 PMLP29590 882 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 APLP1P51693 650 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 MYBPC1Q00872 1141 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 SNAPC2Q13487 334 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 UGCGQ16739 394 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ALKBH5Q6P6C2 394 aaKnown RBP12.33□□□□□ -0.44
RTN3-203ENST00000341307 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ULK2Q8IYT8 1036 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 ANKRD35Q8N283 1001 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 GDPD5Q8WTR4 605 aa12.33□□□□□ -0.44
RTN3-203ENST00000341307 EGLN2Q96KS0 407 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms