RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 FLT3P36888 993 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 CACNA2D1P54289 1103 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 MRPS5P82675 430 aaKnown RBP18.18■□□□□ 0.5
CLDN4-201ENST00000340958 ATP11AP98196 1134 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 ACAP1Q15027 740 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 USP41Q3LFD5 358 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 SLC26A9Q7LBE3 791 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 RASGEF1CQ8N431 466 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 BCL7CQ8WUZ0 217 aaPredicted RBP18.18■□□□□ 0.5
CLDN4-201ENST00000340958 CFAP57Q96MR6 1250 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 AP1M1Q9BXS5 423 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 ZWILCHQ9H900 591 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 PCDHB5Q9Y5E4 795 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 CHD9Q3L8U1 2897 aa18.18■□□□□ 0.5
CLDN4-201ENST00000340958 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.17■□□□□ 0.5
CLDN4-201ENST00000340958 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.17■□□□□ 0.5
CLDN4-201ENST00000340958 RHOXF2BP0C7M4 288 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 CYP2F1P24903 491 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 SCNN1AP37088 669 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 NDUFV1P49821 464 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 RTP2Q5QGT7 225 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 RSRC2Q7L4I2 434 aaKnown RBP18.17■□□□□ 0.5
CLDN4-201ENST00000340958 TAS1R1Q7RTX1 841 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 ADAT2Q7Z6V5 191 aaKnown RBP18.17■□□□□ 0.5
CLDN4-201ENST00000340958 ZMIZ2Q8NF64 920 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 RHOXF2Q9BQY4 288 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 CSNK1G1Q9HCP0 422 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 AAASQ9NRG9 546 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 PCSK1NQ9UHG2 260 aa18.17■□□□□ 0.5
CLDN4-201ENST00000340958 MRPL42Q9Y6G3 142 aaKnown RBP18.17■□□□□ 0.5
CLDN4-201ENST00000340958 CARNS1A5YM72 827 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 C2CD2LO14523 706 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 CAPN9O14815 690 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 SART1O43290 800 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 HSF2BPO75031 334 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 ZRANB2O95218 330 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 KRT1P04264 644 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 KRT7P08729 469 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 ATP2A2P16615 1042 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 SMAD3P84022 425 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 IFRD2Q12894 506 aaPredicted RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 MRPL58Q14197 206 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 C15orf59Q2T9L4 293 aaPredicted RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 AADACL2Q6P093 401 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 SCYL2Q6P3W7 929 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 ZNF572Q7Z3I7 529 aaPredicted RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 NOA1Q8NC60 698 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 RIN2Q8WYP3 895 aaPredicted RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 NDRG1Q92597 394 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 OXCT2Q9BYC2 517 aaPredicted RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 ULBP1Q9BZM6 244 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 NGRNQ9NPE2 291 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 CNGB3Q9NQW8 809 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 KLHL11Q9NVR0 708 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 DDX56Q9NY93 547 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 LRCH4O75427 683 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 ZBED1O96006 694 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 USP17L7P0C7H9 530 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 YWHAZP63104 245 aaKnown RBP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 ITIH3Q06033 890 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 CCDC14Q49A88 953 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 LRRC38Q5VT99 294 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 KATNAL2Q8IYT4 538 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 FUBP3Q96I24 572 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLDN4-201ENST00000340958 MTUS1Q9ULD2 1270 aa18.16■□□□□ 0.5
CLDN4-201ENST00000340958 PRPSAP2O60256 369 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 TCF4P15884 667 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 PBX2P40425 430 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 LLGL1Q15334 1064 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 PRSS55Q6UWB4 352 aaPredicted RBP18.15■□□□□ 0.5
CLDN4-201ENST00000340958 GPRIN1Q7Z2K8 1008 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 KLHL7Q8IXQ5 586 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 COLGALT1Q8NBJ5 622 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 FAM172AQ8WUF8 416 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 RNF25Q96BH1 459 aaPredicted RBP18.15■□□□□ 0.5
CLDN4-201ENST00000340958 RBM41Q96IZ5 413 aaKnown RBP18.15■□□□□ 0.5
CLDN4-201ENST00000340958 NCAPGQ9BPX3 1015 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 TMEM30AQ9NV96 361 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 SPG21Q9NZD8 308 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 TTC7AQ9ULT0 858 aaPredicted RBP18.15■□□□□ 0.5
CLDN4-201ENST00000340958 USP18Q9UMW8 372 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 PCDHB12Q9Y5F1 795 aa18.15■□□□□ 0.5
CLDN4-201ENST00000340958 DPYSL4O14531 572 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 TRIM66O15016 1216 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 MIPP30301 263 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 ADCY1Q08828 1119 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 SMARCB1Q12824 385 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 PSMD5Q16401 504 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 SMTNL2Q2TAL5 461 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 DCAF6Q58WW2 860 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 RAB41Q5JT25 222 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 RCOR2Q8IZ40 523 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 DEFB106AQ8N104 65 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 FIBCD1Q8N539 461 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 EXD1Q8NHP7 514 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 SLC9A7Q96T83 725 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 PBX4Q9BYU1 374 aa18.14■□□□□ 0.5
CLDN4-201ENST00000340958 POPDC2Q9HBU9 364 aa18.14■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms