RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 DUS2Q9NX74 493 aaKnown RBP14.12□□□□□ -0.15
SIRPB3P-201ENST00000340424 PPP1R3GB7ZBB8 358 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 SLC9A3R1O14745 358 aaPredicted RBP14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 P4HA2O15460 535 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 CHRNB1P11230 501 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 CD58P19256 250 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 BMP6P22004 513 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 TBXAS1P24557 533 aaPredicted RBP14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 TNK2Q07912 1038 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 NR1H3Q13133 447 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 CCDC40Q4G0X9 1142 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 CBWD6Q4V339 395 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 CBWD3Q5JTY5 395 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 CBWD5Q5RIA9 395 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 HECTD3Q5T447 861 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 ISM2Q6H9L7 571 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 C12orf29Q8N999 325 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 SH3RF2Q8TEC5 729 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 TWNKQ96RR1 684 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 PHOX2BQ99453 314 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 SMOQ99835 787 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 EBF3Q9H4W6 596 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 LMAN1LQ9HAT1 526 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 HPS4Q9NQG7 708 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 CISHQ9NSE2 258 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 FAM49BQ9NUQ9 324 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 KIAA1468Q9P260 1216 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 PCDHGA2Q9Y5H1 932 aa14.11□□□□□ -0.15
SIRPB3P-201ENST00000340424 GFRA3O60609 400 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 NFATC1O95644 943 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 ABL1P00519 1130 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 ZDHHC11BP0C7U3 371 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 SOX9P48436 509 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 NRLP54845 237 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 MARSP56192 900 aaKnown RBP14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 MAP3K7CLP57077 242 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 SLC8A3P57103 927 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 GRSF1Q12849 480 aaKnown RBP eCLIP14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 IFRD2Q12894 506 aaPredicted RBP14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 MTAPQ13126 283 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 ORC1Q13415 861 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 KLHL10Q6JEL2 608 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 CLEC20AQ6ZU45 233 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 MAML2Q8IZL2 1156 aaPredicted RBP14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 SPEM1Q8N4L4 309 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 ZMIZ2Q8NF64 920 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 CCDC26Q8TAB7 109 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 WHAMMQ8TF30 809 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 TMEM176AQ96HP8 235 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 DUSP9Q99956 384 aaKnown RBP14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 TLR8Q9NR97 1041 aaKnown RBP14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 CTNND2Q9UQB3 1225 aa14.1□□□□□ -0.15
SIRPB3P-201ENST00000340424 PRR23AA6NEV1 266 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 LEFTY2O00292 366 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 BIN1O00499 593 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 TRDMT1O14717 391 aaKnown RBP14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 PAPSS2O95340 614 aaPredicted RBP14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 DRD1P21728 446 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 ADORA2BP29275 332 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 FMO5P49326 533 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 CUL2Q13617 745 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 CCINQ13939 588 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 PON2Q15165 354 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 NFKBIBQ15653 356 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 EML3Q32P44 896 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 TMEM196Q5HYL7 178 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 TRIM68Q6AZZ1 485 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 TXNDC11Q6PKC3 985 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 CLEC17AQ6ZS10 378 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 SCAMP5Q8TAC9 235 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 RIN3Q8TB24 985 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 NELL1Q92832 810 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 OTUB2Q96DC9 234 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 HEXIM2Q96MH2 286 aaKnown RBP14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 DUSP16Q9BY84 665 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 UBXN6Q9BZV1 441 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 ECT2Q9H8V3 914 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 TBC1D14Q9P2M4 693 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 KIAA1257Q9ULG3 409 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 SCML2Q9UQR0 700 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 CPQQ9Y646 472 aa14.09□□□□□ -0.15
SIRPB3P-201ENST00000340424 ATG13O75143 517 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 BEST1O76090 585 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 CCDC192P0DO97 292 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 MBL2P11226 248 aaPredicted RBP14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 ARSAP15289 507 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 CSTF1Q05048 431 aaKnown RBP14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 FBXO43Q4G163 708 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 ARHGAP17Q68EM7 881 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 KLHDC10Q6PID8 442 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 TADA2BQ86TJ2 420 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 MLKLQ8NB16 471 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 TTC8Q8TAM2 541 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 ATRIPQ8WXE1 791 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 TATDN2Q93075 761 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 NT5C1BQ96P26 610 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 CDK5RAP1Q96SZ6 601 aaKnown RBP14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 NACA2Q9H009 215 aa14.08□□□□□ -0.16
SIRPB3P-201ENST00000340424 RNF38Q9H0F5 515 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms