RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 CHI3L2Q15782 390 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 ATG16L1Q676U5 607 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 DHRS4L2Q6PKH6 230 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 DENND5BQ6ZUT9 1274 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 KRT27Q7Z3Y8 459 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 PCGF5Q86SE9 256 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 HPS6Q86YV9 775 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 CROCCP3Q8IVE0 287 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 EFCAB3Q8N7B9 438 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 AKT1S1Q96B36 256 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 TRIM11Q96F44 468 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 GINM1Q9NU53 330 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 HBS1LQ9Y450 684 aaKnown RBP9.78□□□□□ -0.84
NECAP1-201ENST00000339754 IGLV3-22A0A075B6J6 115 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 TMEM247A6NEH6 219 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 SGK1O00141 431 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 CYB561D2O14569 222 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 COPEO14579 308 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 SERPINB7O75635 380 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 POLR2MP0CAP2 368 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 SRGAP2CP0DJJ0 459 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 SRGAP2BP0DMP2 458 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 TSHRP16473 764 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 ATF7P17544 494 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-201ENST00000339754 YY1P25490 414 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 HDAC4P56524 1084 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 MRPS5P82675 430 aaKnown RBP9.78□□□□□ -0.84
NECAP1-201ENST00000339754 WASHC5Q12768 1159 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 KBTBD12Q3ZCT8 623 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 CRLF3Q8IUI8 442 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 TEKT1Q969V4 418 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 CCDC124Q96CT7 223 aaKnown RBP9.78□□□□□ -0.84
NECAP1-201ENST00000339754 KCND2Q9NZV8 630 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 AP4B1Q9Y6B7 739 aa9.78□□□□□ -0.84
NECAP1-201ENST00000339754 TCRBV9S1A1TA0A576 114 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 GOLGA8IPA6NC78 632 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 GOLGA8JA6NMD2 632 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 K7ENM7 598 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 CHMP2AO43633 222 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 ITM2AO43736 263 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 PSMD10O75832 226 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 FBXO21O94952 628 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 RBP3P10745 1247 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 KRT5P13647 590 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 HOXD12P35452 270 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 STT3AP46977 705 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 GDF10P55107 478 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 PFKPQ01813 784 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 BBS9Q3SYG4 887 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 TCHHL1Q5QJ38 904 aaPredicted RBP9.77□□□□□ -0.84
NECAP1-201ENST00000339754 KRT39Q6A163 491 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 PACS1Q6VY07 963 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 SPOCD1Q6ZMY3 1216 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 PATL1Q86TB9 770 aaKnown RBP9.77□□□□□ -0.84
NECAP1-201ENST00000339754 TICAM1Q8IUC6 712 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 PQLC1Q8N2U9 271 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 FBXW8Q8N3Y1 598 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 SLC35B2Q8TB61 432 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 TAS1R2Q8TE23 839 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 JDP2Q8WYK2 163 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 CNBD2Q96M20 576 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 NT5C1BQ96P26 610 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 NACC1Q96RE7 527 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 TSPYL2Q9H2G4 693 aaPredicted RBP9.77□□□□□ -0.84
NECAP1-201ENST00000339754 Q9H521 79 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 TMEM206Q9H813 350 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 C10orf88Q9H8K7 445 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 LIN28AQ9H9Z2 209 aaKnown RBP9.77□□□□□ -0.84
NECAP1-201ENST00000339754 C6orf203Q9P0P8 240 aaPredicted RBP9.77□□□□□ -0.84
NECAP1-201ENST00000339754 THEGQ9P2T0 379 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 ITGA11Q9UKX5 1188 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 PADI4Q9UM07 663 aa9.77□□□□□ -0.84
NECAP1-201ENST00000339754 CCDC195A0A1B0GUA6 201 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 WDR46O15213 610 aaKnown RBP9.77□□□□□ -0.85
NECAP1-201ENST00000339754 DKC1O60832 514 aaKnown RBP eCLIP9.77□□□□□ -0.85
NECAP1-201ENST00000339754 TMEM63AO94886 807 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 FOSP01100 380 aaPredicted RBP9.77□□□□□ -0.85
NECAP1-201ENST00000339754 CFHP08603 1231 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 CYP3A4P08684 503 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 THRAP10827 490 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 L1CAMP32004 1257 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 NSFP46459 744 aaKnown RBP9.77□□□□□ -0.85
NECAP1-201ENST00000339754 COPAP53621 1224 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 MTTPP55157 894 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 CNGA3Q16281 694 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 PLEKHA7Q6IQ23 1121 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 PRR5LQ6MZQ0 368 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 ELMSAN1Q6PJG2 1045 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 NUDCD3Q8IVD9 361 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 CCDC33Q8N5R6 958 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 WDR18Q9BV38 432 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 PLGRKTQ9HBL7 147 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 RAB20Q9NX57 234 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 ZNRF3Q9ULT6 936 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 PSMD13Q9UNM6 376 aa9.77□□□□□ -0.85
NECAP1-201ENST00000339754 A0A1B0GTW7 788 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 TLR3O15455 904 aaKnown RBP9.76□□□□□ -0.85
NECAP1-201ENST00000339754 KLHL2O95198 593 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 C1QAP02745 245 aa9.76□□□□□ -0.85
NECAP1-201ENST00000339754 INHBAP08476 426 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms