RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 PFKLP17858 780 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 MLLT6P55198 1093 aaPredicted RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 PLCB2Q00722 1185 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 UBXN2BQ14CS0 331 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 SNX30Q5VWJ9 437 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 ARHGAP17Q68EM7 881 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 TRIM68Q6AZZ1 485 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 ZNF852Q6ZMS4 543 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 RBM43Q6ZSC3 357 aaKnown RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 ARHGEF19Q8IW93 802 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 EHBP1Q8NDI1 1231 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 TTC8Q8TAM2 541 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 OVCA2Q8WZ82 227 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 CLDN23Q96B33 292 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 CHFRQ96EP1 664 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 NT5C1BQ96P26 610 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 SLITRK1Q96PX8 696 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 DUSP16Q9BY84 665 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 COMMD8Q9NX08 183 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 GMIPQ9P107 970 aa16.14■□□□□ 0.17
PRKN-201ENST00000338468 CHORDC1Q9UHD1 332 aaPredicted RBP16.14■□□□□ 0.17
PRKN-201ENST00000338468 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRKN-201ENST00000338468 MYH10P35580 1976 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 SP9P0CG40 484 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 ARSAP15289 507 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 SLC7A9P82251 487 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 MTF1Q14872 753 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 TXNDC11Q6PKC3 985 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 C1orf210Q8IVY1 113 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 CSGALNACT1Q8TDX6 532 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 SH3RF2Q8TEC5 729 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 JAKMIP2Q96AA8 810 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 KREMEN1Q96MU8 473 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 PNPLA8Q9NP80 782 aa16.13■□□□□ 0.17
PRKN-201ENST00000338468 THG1LQ9NWX6 298 aaKnown RBP16.13■□□□□ 0.17
PRKN-201ENST00000338468 SPECC1L-ADORA2AF8WAN1 911 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 RNF225M0QZC1 329 aaPredicted RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 MAN2B1O00754 1011 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 COCHO43405 550 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 ABL1P00519 1130 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 TRIM21P19474 475 aaKnown RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 TBXAS1P24557 533 aaPredicted RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 ERCC5P28715 1186 aaPredicted RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 CTHP32929 405 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 KPNA1P52294 538 aaPredicted RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 RRAGAQ7L523 313 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 TTC30AQ86WT1 665 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 PPM1KQ8N3J5 372 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 PDZD8Q8NEN9 1154 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 FAM3CQ92520 227 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 ZFRQ96KR1 1074 aaKnown RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 NELL2Q99435 816 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 INTS2Q9H0H0 1204 aaKnown RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 EBF3Q9H4W6 596 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 C8orf33Q9H7E9 229 aaPredicted RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 CCSER2Q9H7U1 834 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 OSER1Q9NX31 292 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 NDRG2Q9UN36 371 aaKnown RBP16.12■□□□□ 0.17
PRKN-201ENST00000338468 SCML2Q9UQR0 700 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 WNT6Q9Y6F9 365 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 CACNA1BQ00975 2339 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 EPG5Q9HCE0 2579 aa16.12■□□□□ 0.17
PRKN-201ENST00000338468 LEFTY2O00292 366 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 CYP26A1O43174 497 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 PDE6CP51160 858 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 KIF11P52732 1056 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 CETN1Q12798 172 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 ITPRIPL2Q3MIP1 535 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 MAML2Q8IZL2 1156 aaPredicted RBP16.11■□□□□ 0.17
PRKN-201ENST00000338468 ANKRD52Q8NB46 1076 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 OSCP1Q8WVF1 389 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 TFAP2BQ92481 460 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 ZSWIM1Q9BR11 485 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 THAP9Q9H5L6 903 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 SMPD4Q9NXE4 827 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 DLL3Q9NYJ7 618 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 MRPS17Q9Y2R5 130 aaKnown RBP16.11■□□□□ 0.17
PRKN-201ENST00000338468 CPQQ9Y646 472 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 USP3Q9Y6I4 520 aa16.11■□□□□ 0.17
PRKN-201ENST00000338468 MYO16Q9Y6X6 1858 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 TULP2O00295 520 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 O00370 1275 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 CALCAP01258 141 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 CHRNB1P11230 501 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 RPS9P46781 194 aaKnown RBP16.1■□□□□ 0.17
PRKN-201ENST00000338468 TUBP50607 506 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 ZNF132P52740 706 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 YWHAEP62258 255 aaKnown RBP16.1■□□□□ 0.17
PRKN-201ENST00000338468 APBA1Q02410 837 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 GCNT1Q02742 428 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 RUNX3Q13761 415 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 PDGFRLQ15198 375 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 GOLGA7BQ2TAP0 167 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 EML3Q32P44 896 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 RAB41Q5JT25 222 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 HECTD3Q5T447 861 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 CC2D1AQ6P1N0 951 aaPredicted RBP16.1■□□□□ 0.17
PRKN-201ENST00000338468 TMEM270Q6UE05 265 aa16.1■□□□□ 0.17
PRKN-201ENST00000338468 SCD5Q86SK9 330 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms