RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 CARNS1A5YM72 827 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DPYSL4O14531 572 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ADAM12O43184 909 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RNF8O76064 485 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PYGMP11217 842 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ATP2A2P16615 1042 aaKnown RBP15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SDC4P31431 198 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GTF2F1P35269 517 aaKnown RBP eCLIP15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GPR15P49685 360 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DAOAP59103 153 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ATP11AP98196 1134 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NAA30Q147X3 362 aaPredicted RBP15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ACAP1Q15027 740 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ARCQ7LC44 396 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DDX53Q86TM3 631 aaKnown RBP15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TTC9BQ8N6N2 239 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RAD9AQ99638 391 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HERC2P3Q9BVR0 1158 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PNPLA8Q9NP80 782 aa15.46■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CCDC85CA6NKD9 419 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 EFCAB8A8MWE9 144 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PGRMC1O00264 195 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CTIFO43310 598 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TLL1O43897 1013 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HSF2BPO75031 334 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 VNN2O95498 520 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZBED1O96006 694 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LINC00271P0C7V0 271 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 OR1D2P34982 312 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PPM1AP35813 382 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GLUD2P49448 558 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DSG1Q02413 1049 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 C2orf54Q08AI8 447 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DDR2Q16832 855 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ATP13A4Q4VNC1 1196 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RAB6CQ53S08 254 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 COL13A1Q5TAT6 717 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SEL1L2Q5TEA6 688 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SDHAF4Q5VUM1 108 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TXNRD3NBQ6F5E7 133 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 VSTM1Q6UX27 236 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HFE2Q6ZVN8 426 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZNF572Q7Z3I7 529 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DEFB106AQ8N104 65 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SCAMP5Q8TAC9 235 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PHOSPHO2Q8TCD6 241 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RAB6CQ9H0N0 254 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.45■□□□□ 0.064e-8■□□□□ 8
CDK5RAP3-201ENST00000338399 SLC27A5Q9Y2P5 690 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 BACE2Q9Y5Z0 518 aa15.45■□□□□ 0.06
CDK5RAP3-201ENST00000338399 WDR27A2RRH5 827 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 YJEFN3A6XGL0 299 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 E7ENQ6 273 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TNFRSF10BO14763 440 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 FGGP02679 453 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MIPP30301 263 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MAGEA11P43364 429 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SLC5A3P53794 718 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 YWHAZP63104 245 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ROR1Q01973 937 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SMARCB1Q12824 385 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 IFRD2Q12894 506 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 HADHQ16836 314 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TEX35Q5T0J7 233 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ZFYVE27Q5T4F4 411 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SLC8B1Q6J4K2 584 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 VPS52Q8N1B4 723 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SPATA4Q8NEY3 305 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SPPL2BQ8TCT7 592 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TSC1Q92574 1164 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GOLGA1Q92805 767 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DDX23Q9BUQ8 820 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MTIF3Q9H2K0 278 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CRISPLD1Q9H336 500 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KLHL11Q9NVR0 708 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PCSK1NQ9UHG2 260 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TRIM66O15016 1216 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 DAB1O75553 588 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SOAT2O75908 522 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 FGF18O76093 207 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 GLI1P08151 1106 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 TFE3P19532 575 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 IL1R2P27930 398 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MATKP42679 507 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PTPN9P43378 593 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 SLC25A11Q02978 314 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 ERCC6LQ2NKX8 1250 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 MGAT5BQ3V5L5 792 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 LRRC38Q5VT99 294 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 PM20D1Q6GTS8 502 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RSRC2Q7L4I2 434 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 KATNAL2Q8IYT4 538 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 NOA1Q8NC60 698 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 STKLD1Q8NE28 680 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 FAM172AQ8WUF8 416 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 AUTS2Q8WXX7 1259 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 CLP1Q92989 425 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 RPGRIP1Q96KN7 1286 aa15.44■□□□□ 0.06
CDK5RAP3-201ENST00000338399 C8orf48Q96LL4 319 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms