RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 FBXO32Q969P5 355 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 ACSF2Q96CM8 615 aaPredicted RBP16.19■□□□□ 0.18
SEC13-201ENST00000337354 DNAJC7Q99615 494 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 MIS12Q9H081 205 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 HAUS4Q9H6D7 363 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 GDE1Q9NZC3 331 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 IMPACTQ9P2X3 320 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 PRKAG3Q9UGI9 489 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 CDH22Q9UJ99 828 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 C2orf16Q68DN1 1984 aa16.19■□□□□ 0.18
SEC13-201ENST00000337354 A0A1W2PRU2 124 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 ZNF840PA6NDX5 716 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 SART1O43290 800 aaKnown RBP16.18■□□□□ 0.18
SEC13-201ENST00000337354 MFAP3LO75121 409 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 MOSPD3O75425 235 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 FBXO21O94952 628 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 ZBED1O96006 694 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 CHRNB2P17787 502 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 TNFAIP3P21580 790 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 CCR2P41597 374 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 MRE11P49959 708 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 PDCLQ13371 301 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 SLC5A9Q2M3M2 681 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 GPRIN1Q7Z2K8 1008 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 TMEM150AQ86TG1 271 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 VPS36Q86VN1 386 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 PASD1Q8IV76 773 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 PLCD3Q8N3E9 789 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 MSANTD4Q8NCY6 345 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 STKLD1Q8NE28 680 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 ITFG1Q8TB96 612 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 SLC20A1Q8WUM9 679 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 FGF13Q92913 245 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 PPP1R13BQ96KQ4 1090 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 SYT11Q9BT88 431 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 TLR8Q9NR97 1041 aaKnown RBP16.18■□□□□ 0.18
SEC13-201ENST00000337354 ST7Q9NRC1 585 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 ABHD10Q9NUJ1 306 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 CHORDC1Q9UHD1 332 aaPredicted RBP16.18■□□□□ 0.18
SEC13-201ENST00000337354 CDH7Q9ULB5 785 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 NR2E1Q9Y466 385 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 XIRP2A4UGR9 3374 aa16.18■□□□□ 0.18
SEC13-201ENST00000337354 ZDHHC11BP0C7U3 371 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 RGS7P49802 495 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 ADIGQ0VDE8 80 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 IFRD2Q12894 506 aaPredicted RBP16.17■□□□□ 0.18
SEC13-201ENST00000337354 E4F1Q66K89 784 aaPredicted RBP16.17■□□□□ 0.18
SEC13-201ENST00000337354 HGSNATQ68CP4 663 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 ERICH1Q86X53 443 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 ZDHHC17Q8IUH5 632 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 C1orf131Q8NDD1 294 aaKnown RBP16.17■□□□□ 0.18
SEC13-201ENST00000337354 SHKBP1Q8TBC3 707 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 IPO4Q8TEX9 1081 aaKnown RBP16.17■□□□□ 0.18
SEC13-201ENST00000337354 IRGQQ8WZA9 623 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 TCEAL4Q96EI5 215 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 TASP1Q9H6P5 420 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 CLIC5Q9NZA1 410 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 CYTH4Q9UIA0 394 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 DENND4AQ7Z401 1863 aa16.17■□□□□ 0.18
SEC13-201ENST00000337354 USP17L7P0C7H9 530 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 SKILP12757 684 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 UNGP13051 313 aaPredicted RBP16.16■□□□□ 0.18
SEC13-201ENST00000337354 LCP1P13796 627 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 WEE1P30291 646 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 GABRB2P47870 512 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 TUBP50607 506 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 ADKP55263 362 aaKnown RBP16.16■□□□□ 0.18
SEC13-201ENST00000337354 NOMO3P69849 1222 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 TEAD2Q15562 447 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 TDRD12Q587J7 1177 aaKnown RBP16.16■□□□□ 0.18
SEC13-201ENST00000337354 GET4Q7L5D6 327 aaPredicted RBP16.16■□□□□ 0.18
SEC13-201ENST00000337354 ZNF571Q7Z3V5 609 aaPredicted RBP16.16■□□□□ 0.18
SEC13-201ENST00000337354 SCUBE3Q8IX30 993 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 NPAS3Q8IXF0 933 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 ZNF276Q8N554 614 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 PCDHB18PQ96TA0 734 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 ULBP1Q9BZM6 244 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 SYNCQ9H7C4 482 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 EPS15L1Q9UBC2 864 aa16.16■□□□□ 0.18
SEC13-201ENST00000337354 GOLGA6L6A8MZA4 724 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 GABBR2O75899 941 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 GZMAP12544 262 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 LAMP2P13473 410 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 GJA1P17302 382 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 GBP2P32456 591 aaPredicted RBP16.15■□□□□ 0.18
SEC13-201ENST00000337354 NSFP46459 744 aaKnown RBP16.15■□□□□ 0.18
SEC13-201ENST00000337354 DAOAP59103 153 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 CDK17Q00537 523 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 GSE1Q14687 1217 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 CLEC16AQ2KHT3 1053 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 TADA2BQ86TJ2 420 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 GPIHBP1Q8IV16 184 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 CPA5Q8WXQ8 436 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 GOLGA1Q92805 767 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 C18orf8Q96DM3 657 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 CPXM1Q96SM3 734 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 CDK5RAP1Q96SZ6 601 aaKnown RBP16.15■□□□□ 0.18
SEC13-201ENST00000337354 TRIM62Q9BVG3 475 aa16.15■□□□□ 0.18
SEC13-201ENST00000337354 SEPT11Q9NVA2 429 aaKnown RBP16.15■□□□□ 0.18
SEC13-201ENST00000337354 GMIPQ9P107 970 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms