RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 SMAPO00193 183 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 MAP3K13O43283 966 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 ECE2O60344 883 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 DLG4P78352 724 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 PEX6Q13608 980 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 PTK2BQ14289 1009 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 RC3H1Q5TC82 1133 aaKnown RBP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 HPS6Q86YV9 775 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CCDC103Q8IW40 242 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CCDC130P13994 396 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 NR1H2P55055 460 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 TNFAIP1Q13829 316 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CCDC81Q6ZN84 652 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CAPSLQ8WWF8 208 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 SLC7A3Q8WY07 619 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 LMCD1Q9NZU5 365 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 RSL24D1Q9UHA3 163 aaKnown RBP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 GTPBP10A4D1E9 387 aaKnown RBP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 BCL10O95999 233 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 THRAP10827 490 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 FGFR2P21802 821 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 ETFBP38117 255 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 RAP1GDS1P52306 607 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 MPP2Q14168 576 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 TMEM119Q4V9L6 283 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 PLA2G4FQ68DD2 849 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 TRIM72Q6ZMU5 477 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 FBXO33Q7Z6M2 555 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 GABPB2Q8TAK5 448 aaPredicted RBP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 FAM84AQ96KN4 292 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 PLEKHG4BQ96PX9 1271 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 UNKQ9C0B0 810 aaKnown RBP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 LRRC19Q9H756 370 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 PLGRKTQ9HBL7 147 aa13.73□□□□□ -0.21
COL2A1-201ENST00000337299 RBAKQ9NYW8 714 aaPredicted RBP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.73□□□□□ -0.21
COL2A1-201ENST00000337299 CSDE1O75534 798 aaKnown RBP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 HLA-DRAP01903 254 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 QARSP47897 775 aaKnown RBP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 GLRBP48167 497 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 NME5P56597 212 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 CARTPTQ16568 116 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ZBED2Q9BTP6 218 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 MRPL40Q9NQ50 206 aaKnown RBP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ASNSD1Q9NWL6 643 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ZHX2Q9Y6X8 837 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 PABPN1LA6NDY0 278 aaKnown RBP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 A6NHS1 94 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 MSH4O15457 936 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 RALBP11234 206 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ALADP13716 330 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ACVR2BQ13705 512 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 NCLNQ969V3 563 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 KCNK4Q9NYG8 393 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 SATB2Q9UPW6 733 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 SLIT1O75093 1534 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 EIF3DO15371 548 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 APOA1P02647 267 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 OATP04181 439 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 P4HA1P13674 534 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 GTF2H1P32780 548 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 PTGIRP43119 386 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 BFSP2Q13515 415 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 SPOCD1Q6ZMY3 1216 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ENOSF1Q7L5Y1 443 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 GPD1LQ8N335 351 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 EMC1Q8N766 993 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 KYQ8NBH2 561 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 BHLHE22Q8NFJ8 381 aaPredicted RBP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 EPS8L1Q8TE68 723 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ZC3H15Q8WU90 426 aaKnown RBP13.72□□□□□ -0.21
COL2A1-201ENST00000337299 PPM1HQ9ULR3 514 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 ADGRA3Q8IWK6 1321 aa13.72□□□□□ -0.21
COL2A1-201ENST00000337299 M0QYV0 167 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 MED7O43513 233 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 MFN2O95140 757 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 SLC4A1P02730 911 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 PDK1Q15118 436 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 TFDP3Q5H9I0 405 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 SLC27A3Q5K4L6 730 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 C6orf52Q5T4I8 152 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 CDAN1Q8IWY9 1227 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 LIN28AQ9H9Z2 209 aaKnown RBP13.71□□□□□ -0.21
COL2A1-201ENST00000337299 EFCAB1Q9HAE3 211 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 S100A14Q9HCY8 104 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 SHOC2Q9UQ13 582 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 PSTPIP1O43586 416 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.21
COL2A1-201ENST00000337299 CDH3P22223 829 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 SLC1A6P48664 564 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 NR1D2Q14995 579 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 ZNF699Q32M78 642 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 SEZ6Q53EL9 994 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 C6orf183Q5T699 404 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 UBAP2Q5T6F2 1119 aaKnown RBP13.71□□□□□ -0.21
COL2A1-201ENST00000337299 GPR107Q5VW38 600 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 EXD1Q8NHP7 514 aa13.71□□□□□ -0.21
COL2A1-201ENST00000337299 VPS50Q96JG6 964 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms