RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 DEPDC1BQ8WUY9 529 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 MUL1Q969V5 352 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZBED3Q96IU2 234 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 CITED4Q96RK1 184 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 GTPBP2Q9BX10 602 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 MTMR4Q9NYA4 1195 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TNFRSF10DQ9UBN6 386 aa6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIM49BA6NDI0 452 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF891A8MT65 544 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RNF212BA8MTL3 300 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TRIM49D1C9J1S8 452 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PODXLO00592 558 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SGTAO43765 313 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ATP9BO43861 1147 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 STAU1O95793 577 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 DHFRP00374 187 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 GYS1P13807 737 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CHMLP26374 656 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 EIF4A3P38919 411 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PLA2G4AP47712 749 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MRPS22P82650 360 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ITGADQ13349 1161 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 QPRTQ15274 297 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TSHZ3Q63HK5 1081 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 AFMIDQ63HM1 303 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ERAP2Q6P179 960 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TIPARPQ7Z3E1 657 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR8H2Q8N162 312 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 C7orf31Q8N865 590 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MOSPD2Q8NHP6 518 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SGF29Q96ES7 293 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PAPOLGQ9BWT3 736 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCDHB13Q9Y5F0 798 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TCOF1Q13428 1488 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RGSL1A5PLK6 1076 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ANP32DO95626 131 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CD2P06729 351 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCNA2P20248 432 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TAP1Q03518 808 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RBL2Q08999 1139 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 NAE1Q13564 534 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ABLIM2Q6H8Q1 611 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SULT6B1Q6IMI4 303 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 EMC1Q8N766 993 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ARHGEF26Q96DR7 871 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RBM41Q96IZ5 413 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCDC115Q96NT0 180 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 GSDMCQ9BYG8 508 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MLXIPQ9HAP2 919 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 FAM105AQ9NUU6 356 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 GPRC5BQ9NZH0 403 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF180Q9UJW8 692 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CLEC4AQ9UMR7 237 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 VIRMAQ69YN4 1812 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 A8MUI8 341 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TOX4O94842 621 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 DARSP14868 501 aaKnown RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 DPEP1P16444 411 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ALOX12P18054 663 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 AMPD2Q01433 879 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TWF1Q12792 350 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CBLBQ13191 982 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PREPLQ4J6C6 727 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 WDR45BQ5MNZ6 344 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR6P1Q8NGX9 317 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PMM1Q92871 262 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PBKQ96KB5 322 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR2B2Q9GZK3 357 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAPGEFL1Q9UHV5 662 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PCDHGB3Q9Y5G1 929 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZW10O43264 779 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 SH3BGRLO75368 114 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CTNNB1P35222 781 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 AP3B2Q13367 1082 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RASAL3Q86YV0 1011 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RCN3Q96D15 328 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TXN2Q99757 166 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZKSCAN3Q9BRR0 538 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 FSD1LQ9BXM9 530 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 PANK2Q9BZ23 570 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TFECO14948 347 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MTX2O75431 263 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 YES1P07947 543 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 MYBL2P10244 700 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ABATP80404 500 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 NFIXQ14938 502 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ZNF618Q5T7W0 954 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 AADACL4Q5VUY2 407 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 RAB11FIP2Q7L804 512 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 CCDC117Q8IWD4 279 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 C12orf56Q8IXR9 622 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 KBTBD2Q8IY47 623 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 TSPYL6Q8N831 410 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 WDSUB1Q8N9V3 476 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 OR52K2Q8NGK3 314 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 ST7LQ8TDW4 575 aa6.25□□□□□ -1.41
CDC42BPA-201ENST00000334218 UPF1Q92900 1129 aaKnown RBP eCLIP6.25□□□□□ -1.412e-6■■□□□ 12.6
CDC42BPA-201ENST00000334218 IFT43Q96FT9 208 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms