RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 USP1O94782 785 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 EGFRP00533 1210 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 NR3C2P08235 984 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 ALDH18A1P54886 795 aaKnown RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 AQP5P55064 265 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 CHI3L2Q15782 390 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 TRMT5Q32P41 509 aaKnown RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 PTPN20Q4JDL3 420 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 TTC39BQ5VTQ0 682 aaPredicted RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 THNSL1Q8IYQ7 743 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 E2F7Q96AV8 911 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 ZNF518BQ9C0D4 1074 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 MTMR12Q9C0I1 747 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 A0A0B4J269 797 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 DCAF8L1A6NGE4 600 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 CYB561D2O14569 222 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 WDR46O15213 610 aaKnown RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 EDN1P05305 212 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 EIF4BP23588 611 aaKnown RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 AP2B1P63010 937 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 NR1H4Q96RI1 486 aaPredicted RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 WWP1Q9H0M0 922 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 ASCC2Q9H1I8 757 aaPredicted RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 JPH1Q9HDC5 661 aaPredicted RBP24.6■■□□□ 1.53
TSKU-201ENST00000333090 TAGLN3Q9UI15 199 aa24.6■■□□□ 1.53
TSKU-201ENST00000333090 APOC4-APOC2K7ER74 178 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 APOC2P02655 101 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 KCNA2P16389 499 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 CCND2P30279 289 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 ABCD1P33897 745 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 DARS2Q6PI48 645 aaKnown RBP24.59■■□□□ 1.53
TSKU-201ENST00000333090 NPNTQ6UXI9 565 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 VSIG10LQ86VR7 867 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 C7orf26Q96N11 449 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 RILPQ96NA2 401 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 PLA2G4CQ9UP65 541 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 ACTR3P61158 418 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 CES4AQ5XG92 561 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 DENND1BQ6P3S1 775 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 RNF217Q8TC41 542 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 TUBGCP5Q96RT8 1024 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 ZCWPW1Q9H0M4 648 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 DDX43Q9NXZ2 648 aaKnown RBP24.59■■□□□ 1.53
TSKU-201ENST00000333090 PLLPQ9Y342 182 aa24.59■■□□□ 1.53
TSKU-201ENST00000333090 KRT37O76014 449 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 TNFSF9P41273 254 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 ACTR2P61160 394 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 ATG16L1Q676U5 607 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 FAF2Q96CS3 445 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 GPRASP2Q96D09 838 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 MTBPQ96DY7 904 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 ECSITQ9BQ95 431 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 PPM1HQ9ULR3 514 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 FZD1Q9UP38 647 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 CXorf49A8MYA2 514 aaPredicted RBP24.58■■□□□ 1.53
TSKU-201ENST00000333090 ITGBL1O95965 494 aaPredicted RBP24.58■■□□□ 1.53
TSKU-201ENST00000333090 CD19P15391 556 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 PSMC1P62191 440 aaKnown RBP24.58■■□□□ 1.53
TSKU-201ENST00000333090 BMPR2Q13873 1038 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 MYLK4Q86YV6 388 aaPredicted RBP24.58■■□□□ 1.53
TSKU-201ENST00000333090 EGFL6Q8IUX8 553 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 NIF3L1Q9GZT8 377 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 FAM192AQ9GZU8 254 aa24.58■■□□□ 1.53
TSKU-201ENST00000333090 PRR5-ARHGAP8B1AHC4 643 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 SNRPAP09012 282 aaKnown RBP24.57■■□□□ 1.52
TSKU-201ENST00000333090 MRPS5P82675 430 aaKnown RBP24.57■■□□□ 1.52
TSKU-201ENST00000333090 ARHGAP8P85298 464 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 ROR1Q01973 937 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 RASIP1Q5U651 963 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 NUDCD3Q8IVD9 361 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 WDR81Q562E7 1941 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 TBC1D12O60347 775 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 RPS6KA3P51812 740 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 DNAL1Q4LDG9 190 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 TRIM42Q8IWZ5 723 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 GMLQ99445 158 aa24.57■■□□□ 1.52
TSKU-201ENST00000333090 SPAG6O75602 509 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 POLR2BP30876 1174 aaKnown RBP24.56■■□□□ 1.52
TSKU-201ENST00000333090 TGFB2P61812 414 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 TAZQ16635 292 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 XKR3Q5GH77 459 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 RAB6BQ9NRW1 208 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 CYTH4Q9UIA0 394 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 RIPK3Q9Y572 518 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 MEI4A8MW99 385 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 RGS20O76081 388 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 GSTT1P30711 240 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 CDH5P33151 784 aaPredicted RBP24.56■■□□□ 1.52
TSKU-201ENST00000333090 HIRAP54198 1017 aaPredicted RBP24.56■■□□□ 1.52
TSKU-201ENST00000333090 CDC16Q13042 620 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 MMRN1Q13201 1228 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 UBAP2LQ14157 1087 aaKnown RBP24.56■■□□□ 1.52
TSKU-201ENST00000333090 KCNJ11Q14654 390 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 ZBTB33Q86T24 672 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 CRLF3Q8IUI8 442 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 TTLL3Q9Y4R7 772 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 ARID2Q68CP9 1835 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 ADGRA2Q96PE1 1338 aa24.56■■□□□ 1.52
TSKU-201ENST00000333090 PIGRP01833 764 aa24.55■■□□□ 1.52
TSKU-201ENST00000333090 TCHPQ9BT92 498 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms