RNA–Protein interactions for RNA: ENST00000332246.10

CSGALNACT1-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 3,872 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-201ENST00000332246 YTHDF3Q7Z739 585 aaKnown RBP10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 NUP93Q8N1F7 819 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SPATA6LQ8N4H0 392 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ATXN2LQ8WWM7 1075 aaKnown RBP10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SLITRK1Q96PX8 696 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 PIF1Q9H611 641 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 MTO1Q9Y2Z2 717 aaKnown RBP10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 MYO18AQ92614 2054 aaKnown RBP10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SNED1Q8TER0 1413 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SDK1Q7Z5N4 2213 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 H0YGN5 161 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 DCXO43602 365 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 STAG3L1P0CL83 205 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 GARTP22102 1010 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 WDR4P57081 412 aaKnown RBP10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 LAMTOR4Q0VGL1 99 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 UBAP2LQ14157 1087 aaKnown RBP10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SH3PXD2AQ5TCZ1 1133 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 MOB2Q70IA6 237 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SCUBE1Q8IWY4 988 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 DEFB107AQ8IZN7 70 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 TNS4Q8IZW8 715 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 FAM13CQ8NE31 585 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 APPL1Q9UKG1 709 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 TSPAN16Q9UKR8 245 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 PLA2G4CQ9UP65 541 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 NFS1Q9Y697 457 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 MYH11P35749 1972 aa10.19□□□□□ -0.78
CSGALNACT1-201ENST00000332246 TAF1P21675 1872 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 WDR27A2RRH5 827 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 LMNAP02545 664 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 PROCP04070 461 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 EFNA5P52803 228 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 CACNA2D1P54289 1103 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 GDF10P55107 478 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 PKNOX1P55347 436 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 GCNT1Q02742 428 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 LRRC23Q53EV4 343 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 BZW1Q7L1Q6 419 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SLFN11Q7Z7L1 901 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 TRABD2AQ86V40 505 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 EDEM1Q92611 657 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 CGRRF1Q99675 332 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 FSD1LQ9BXM9 530 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 DCLRE1BQ9H816 532 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 PAK5Q9P286 719 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 STXBP5LQ9Y2K9 1186 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SPATA31A6Q5VVP1 1343 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 M0QZ92 97 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 AP1G2O75843 785 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 RASSF9O75901 435 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ERVK-10P10266 1014 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 CETPP11597 493 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 TFE3P19532 575 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 CALB2P22676 271 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 PEX5P50542 639 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 RABGGTBP53611 331 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 BST1Q10588 318 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 MAP3K21Q5TCX8 1036 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 TTC39BQ5VTQ0 682 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 LRRC8EQ6NSJ5 796 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 VSTM1Q6UX27 236 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ZSCAN18Q8TBC5 510 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 STK32AQ8WU08 396 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 MMP19Q99542 508 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ASCC2Q9H1I8 757 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 CCDC68Q9H2F9 335 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 RNPEPQ9H4A4 650 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ARHGAP26Q9UNA1 814 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ZNF711Q9Y462 761 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 URB1O60287 2271 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 A0A0B4J269 797 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 UBA6A0AVT1 1052 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 YDJCA8MPS7 323 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 M0QYT0 321 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 EGFRP00533 1210 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 XRCC4Q13426 336 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 BMT2Q1RMZ1 405 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ZACNQ401N2 412 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 FNBP1LQ5T0N5 605 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 N4BP2L1Q5TBK1 243 aaPredicted RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 RFWD3Q6PCD5 774 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ZDHHC14Q8IZN3 488 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ZCCHC9Q8N567 271 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 DIS3LQ8TF46 1054 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 BHMTQ93088 406 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 ALKBH8Q96BT7 664 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 TLCD1Q96CP7 247 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 HERPUD2Q9BSE4 406 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 RNPEPL1Q9HAU8 725 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 APOBEC3GQ9HC16 384 aaKnown RBP10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 VCX3AQ9NNX9 186 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 CHST12Q9NRB3 414 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 RHBDL2Q9NX52 303 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 C5P01031 1676 aa10.18□□□□□ -0.78
CSGALNACT1-201ENST00000332246 EDIL3O43854 480 aa10.17□□□□□ -0.78
CSGALNACT1-201ENST00000332246 SMNDC1O75940 238 aaKnown RBP eCLIP10.17□□□□□ -0.78
CSGALNACT1-201ENST00000332246 MYL3P08590 195 aa10.17□□□□□ -0.78
CSGALNACT1-201ENST00000332246 NFICP08651 508 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms