RNA–Protein interactions for RNA: ENST00000331493.6

EFCAB13-201, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFCAB13, Length 3,931 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-201ENST00000331493 KRT34O76011 436 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 KRT37O76014 449 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 STAG3L1P0CL83 205 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 DESP17661 470 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 PTDSS1P48651 473 aaKnown RBP12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 NDST1P52848 882 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 ATXN1P54253 815 aaKnown RBP12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 XRRA1Q6P2D8 792 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 MOB2Q70IA6 237 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 HACE1Q8IYU2 909 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 POU5F2Q8N7G0 328 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 KIF12Q96FN5 646 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 L3MBTL3Q96JM7 780 aaPredicted RBP12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 SRPK1Q96SB4 655 aaKnown RBP12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 CSADQ9Y600 493 aa12.3□□□□□ -0.44
EFCAB13-201ENST00000331493 CALB2P22676 271 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 SDC4P31431 198 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 EML3Q32P44 896 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 SMC1BQ8NDV3 1235 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 C10orf82Q8WW14 230 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 FOXP3Q9BZS1 431 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 HESX1Q9UBX0 185 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ATAD5Q96QE3 1844 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 A6NJR5 290 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 TXNDC9O14530 226 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 SMIM24O75264 130 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 FARP2O94887 1054 aaPredicted RBP12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ABHD2P08910 425 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 NCF2P19878 526 aaPredicted RBP12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 SERPINB4P48594 390 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 RIPK1Q13546 671 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 C6orf163Q5TEZ5 329 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 UNC5BQ8IZJ1 945 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 STK32AQ8WU08 396 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 FAM172AQ8WUF8 416 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 DNAJC9Q8WXX5 260 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ZNF408Q9H9D4 720 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 PDLIM7Q9NR12 457 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 PDGFCQ9NRA1 345 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 DLGAP2Q9P1A6 1054 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 HES2Q9Y543 173 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 SIGLEC16A6NMB1 481 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 FCHO1O14526 889 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 CCDC22O60826 627 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ARIH2O95376 493 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 GM2AP17900 193 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 EIF4BP23588 611 aaKnown RBP12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 PTPN4P29074 926 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 GMPRP36959 345 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 Q3C1V9 767 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 LGSNQ5TDP6 509 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 CATSPERGQ6ZRH7 1159 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ARFGAP1Q8N6T3 406 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 NSL1Q96IY1 281 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ELOVL4Q9GZR5 314 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 KLC2Q9H0B6 622 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ACSS3Q9H6R3 686 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 TSPAN16Q9UKR8 245 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 DRG1Q9Y295 367 aaKnown RBP12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 ACTL7BQ9Y614 415 aa12.29□□□□□ -0.44
EFCAB13-201ENST00000331493 CXorf49A8MYA2 514 aaPredicted RBP12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 MSCO60682 206 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 GPD1P21695 349 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 OSBPP22059 807 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 GRIA1P42261 906 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 ATXN3P54252 364 aaPredicted RBP12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 AQP5P55064 265 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 TFDP2Q14188 446 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 KCTD2Q14681 263 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 CRYMQ14894 314 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 RASA2Q15283 850 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 IER5Q5VY09 327 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 BBS12Q6ZW61 710 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 SLC35B2Q8TB61 432 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 PCYT2Q99447 389 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 NMUR2Q9GZQ4 415 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 PACSIN3Q9UKS6 424 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 MAFBQ9Y5Q3 323 aaPredicted RBP12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 CITO14578 2027 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 LTBP4Q8N2S1 1624 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 GPR25O00155 361 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 CREB3O43889 395 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 NPTXRO95502 500 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 LSM8O95777 96 aaKnown RBP12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 UBTFL6P0CB48 400 aaPredicted RBP12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 TAP1Q03518 808 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 GOLGA7BQ2TAP0 167 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 TMEM154Q6P9G4 183 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 POLNQ7Z5Q5 900 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 C1orf127Q8N9H9 656 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 NKD2Q969F2 451 aaPredicted RBP12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 TMEM176AQ96HP8 235 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 CLMNQ96JQ2 1002 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 SDCBP2Q9H190 292 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 CDT1Q9H211 546 aa12.28□□□□□ -0.44
EFCAB13-201ENST00000331493 VPS11Q9H270 941 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms