RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 KBTBD12Q3ZCT8 623 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 WDR78Q5VTH9 848 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 EEF1DP3Q658K8 133 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 NPNTQ6UXI9 565 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 TRIM50Q86XT4 487 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 EXOC8Q8IYI6 725 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 SLC44A1Q8WWI5 657 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 SERAC1Q96JX3 654 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 TWNKQ96RR1 684 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 NUDCD1Q96RS6 583 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 INO80BQ9C086 356 aaPredicted RBP16.03■□□□□ 0.16
BRCC3-201ENST00000330045 SPATC1LQ9H0A9 340 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 RPF1Q9H9Y2 349 aaKnown RBP16.03■□□□□ 0.16
BRCC3-201ENST00000330045 HEY2Q9UBP5 337 aa16.03■□□□□ 0.16
BRCC3-201ENST00000330045 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.02■□□□□ 0.16
BRCC3-201ENST00000330045 ZBTB42B2RXF5 422 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 ECM2O94769 699 aaPredicted RBP16.02■□□□□ 0.16
BRCC3-201ENST00000330045 DHRS4L1P0CG22 281 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 PCK1P35558 622 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 ETV4P43268 484 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 CDH6P55285 790 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 YWHAGP61981 247 aaKnown RBP eCLIP16.02■□□□□ 0.16
BRCC3-201ENST00000330045 FAAP100Q0VG06 881 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 NOMO1Q15155 1222 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 TAF11Q15544 211 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 FAM102AQ5T9C2 384 aaPredicted RBP16.02■□□□□ 0.16
BRCC3-201ENST00000330045 TMEM192Q8IY95 271 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 C1orf127Q8N9H9 656 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 ZC3H15Q8WU90 426 aaKnown RBP16.02■□□□□ 0.16
BRCC3-201ENST00000330045 APOPT1Q96IL0 206 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 NLRP4Q96MN2 994 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 ADPGKQ9BRR6 497 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 FZD8Q9H461 694 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 SMYD3Q9H7B4 428 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 HMGXB4Q9UGU5 601 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 RPL26L1Q9UNX3 145 aaKnown RBP16.02■□□□□ 0.16
BRCC3-201ENST00000330045 TEX264Q9Y6I9 313 aa16.02■□□□□ 0.16
BRCC3-201ENST00000330045 IL18RAPO95256 599 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 CYP2C8P10632 490 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 NEFHP12036 1026 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 NEK3P51956 506 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 ARFIP2P53365 341 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 SLC18A2Q05940 514 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 CHSY1Q86X52 802 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 TMEM176AQ96HP8 235 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 FAM111AQ96PZ2 611 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 PEBP4Q96S96 227 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 TUBB6Q9BUF5 446 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 ELOVL4Q9GZR5 314 aa16.02■□□□□ 0.15
BRCC3-201ENST00000330045 DENND2DQ9H6A0 471 aaPredicted RBP16.02■□□□□ 0.15
BRCC3-201ENST00000330045 A0A0G2JMZ2 1700 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 LRRC37A2A6NM11 1700 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 M0QYV0 167 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 SPAG6O75602 509 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 ENDOD1O94919 500 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 HAUS5O94927 633 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 GJB1P08034 283 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 PYGBP11216 843 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 GPD2P43304 727 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 ZNF143P52747 638 aaPredicted RBP16.01■□□□□ 0.15
BRCC3-201ENST00000330045 KCNJ11Q14654 390 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 SYCP2LQ5T4T6 812 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 TMEM130Q8N3G9 435 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 ENDOVQ8N8Q3 282 aaKnown RBP16.01■□□□□ 0.15
BRCC3-201ENST00000330045 TTC17Q96AE7 1141 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 FAF2Q96CS3 445 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 FAXDC2Q96IV6 333 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 CDT1Q9H211 546 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.01■□□□□ 0.15
BRCC3-201ENST00000330045 RBPJLQ9UBG7 517 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.01■□□□□ 0.15
BRCC3-201ENST00000330045 CFAP69A5D8W1 941 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 H7C0C1 242 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 CCDC22O60826 627 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 CILPO75339 1184 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 TGDSO95455 350 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 NFICP08651 508 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 ATP5OP48047 213 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 TFDP2Q14188 446 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 PRKD1Q15139 912 aaPredicted RBP16.01■□□□□ 0.15
BRCC3-201ENST00000330045 HSDL1Q3SXM5 330 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 SH3PXD2AQ5TCZ1 1133 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 SH2D5Q6ZV89 423 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 RIOX2Q8IUF8 465 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 SH3TC2Q8TF17 1288 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 NAF1Q96HR8 494 aaKnown RBP16.01■□□□□ 0.15
BRCC3-201ENST00000330045 GPR20Q99678 358 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 KCNH4Q9UQ05 1017 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 MTO1Q9Y2Z2 717 aaKnown RBP16.01■□□□□ 0.15
BRCC3-201ENST00000330045 LRRC42Q9Y546 428 aa16.01■□□□□ 0.15
BRCC3-201ENST00000330045 NOP56O00567 594 aaKnown RBP16■□□□□ 0.15
BRCC3-201ENST00000330045 CHADO15335 359 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 AVILO75366 819 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 ITGB3P05106 788 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 FAM47CQ5HY64 1035 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 TTC8Q8TAM2 541 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 MIPEPQ99797 713 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 KCNK13Q9HB14 408 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 LACTBL1A8MY62 500 aa16■□□□□ 0.15
BRCC3-201ENST00000330045 ENTPD5O75356 428 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms