RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 XPNPEP3Q9NQH7 507 aa16.68■□□□□ 0.26
SYNM-201ENST00000328642 FAM47DPA6NHR8 397 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 TULP2O00295 520 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 CYP2F1P24903 491 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 KLHL38Q2WGJ6 581 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 SLC10A6Q3KNW5 377 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 MAP7D1Q3KQU3 841 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 ARMC2Q8NEN0 867 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 USP6NLQ92738 828 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 ZNF669Q96BR6 464 aaPredicted RBP16.67■□□□□ 0.26
SYNM-201ENST00000328642 C12orf42Q96LP6 360 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 XIRP1Q702N8 1843 aaKnown RBP16.67■□□□□ 0.26
SYNM-201ENST00000328642 NCANO14594 1321 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 STAMBPO95630 424 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 JCHAINP01591 159 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 ERBB2P04626 1255 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 MMP8P22894 467 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 ELF1P32519 619 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 DUPD1Q68J44 220 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 KDM7AQ6ZMT4 941 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 LRRC37BQ96QE4 947 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 RNF39Q9H2S5 420 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 WDCPQ9H6R7 721 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 SUDS3Q9H7L9 328 aaPredicted RBP16.67■□□□□ 0.26
SYNM-201ENST00000328642 UBN1Q9NPG3 1134 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 AVENQ9NQS1 362 aaPredicted RBP16.67■□□□□ 0.26
SYNM-201ENST00000328642 CDY2AQ9Y6F7 541 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 FAM107AO95990 144 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 CREB1P16220 341 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 GARSP41250 739 aaKnown RBP16.67■□□□□ 0.26
SYNM-201ENST00000328642 BZW1Q7L1Q6 419 aaKnown RBP16.67■□□□□ 0.26
SYNM-201ENST00000328642 TFAP2DQ7Z6R9 452 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 IQCKQ8N0W5 287 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 PDCD7Q8N8D1 485 aaKnown RBP16.67■□□□□ 0.26
SYNM-201ENST00000328642 SENP8Q96LD8 212 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 SLC12A6Q9UHW9 1150 aa16.67■□□□□ 0.26
SYNM-201ENST00000328642 DIAPH2O60879 1101 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 ESRRAP11474 423 aaPredicted RBP16.66■□□□□ 0.26
SYNM-201ENST00000328642 KDELR1P24390 212 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 CD52P31358 61 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 FLT3LGP49771 235 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 C1orf220Q5T0J3 134 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 AGBL2Q5U5Z8 902 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 IQSEC1Q6DN90 963 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 SPATA21Q7Z572 469 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 PIGZQ86VD9 579 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 UPF1Q92900 1129 aaKnown RBP eCLIP16.66■□□□□ 0.26
SYNM-201ENST00000328642 CCDC68Q9H2F9 335 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 DPEP3Q9H4B8 488 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 CYP4F11Q9HBI6 524 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 CIB2O75838 187 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 MAGEA9P43362 315 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 BRCC3P46736 316 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 FOXR2Q6PJQ5 311 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 UNC45BQ8IWX7 931 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 ERP27Q96DN0 273 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 SLITRK1Q96PX8 696 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 EPAS1Q99814 870 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 SYT15Q9BQS2 421 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 NIFKQ9BYG3 293 aaKnown RBP16.66■□□□□ 0.26
SYNM-201ENST00000328642 TRIM55Q9BYV6 548 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 ULBP1Q9BZM6 244 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 ANKRD36CQ5JPF3 1778 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 CNTNAP2Q9UHC6 1331 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 NT5C1B-RDH14C9J2C7 533 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 PPFIA2O75334 1257 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 LSM8O95777 96 aaKnown RBP16.66■□□□□ 0.26
SYNM-201ENST00000328642 BCAT1P54687 386 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 FASTKD3Q14CZ7 662 aaKnown RBP16.66■□□□□ 0.26
SYNM-201ENST00000328642 KYAT1Q16773 422 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 KAT2BQ92831 832 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 MAML3Q96JK9 1138 aa16.66■□□□□ 0.26
SYNM-201ENST00000328642 EPHB1P54762 984 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 FCGRTP55899 365 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 RTP1P59025 263 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 EFHC1Q5JVL4 640 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 KCNT2Q6UVM3 1135 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 CTU1Q7Z7A3 348 aaKnown RBP16.65■□□□□ 0.26
SYNM-201ENST00000328642 TTC39CQ8N584 583 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.65■□□□□ 0.266e-9■■■□□ 18.9
SYNM-201ENST00000328642 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 ZNF512Q96ME7 567 aaPredicted RBP16.65■□□□□ 0.26
SYNM-201ENST00000328642 ZNF518BQ9C0D4 1074 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 PSMC3IPQ9P2W1 217 aaPredicted RBP16.65■□□□□ 0.26
SYNM-201ENST00000328642 ITGA11Q9UKX5 1188 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 GIPC1O14908 333 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 DNAJB2P25686 324 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 KDSRQ06136 332 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 STILQ15468 1287 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
SYNM-201ENST00000328642 SCARA3Q6AZY7 606 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 SLFN11Q7Z7L1 901 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 ZBED2Q9BTP6 218 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 PDZD7Q9H5P4 517 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 CDHR5Q9HBB8 845 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 CPSF2Q9P2I0 782 aaKnown RBP16.65■□□□□ 0.26
SYNM-201ENST00000328642 RPS6KL1Q9Y6S9 549 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 LMO2P25791 158 aa16.65■□□□□ 0.26
SYNM-201ENST00000328642 PMLP29590 882 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms