RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PHLDB2Q86SQ0 1253 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 HERC6Q8IVU3 1022 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 ZMIZ2Q8NF64 920 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 CLP1Q92989 425 aaKnown RBP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 FUBP3Q96I24 572 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 SMOQ99835 787 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 SH3GL2Q99962 352 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 SELENOOQ9BVL4 669 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 PNPLA8Q9NP80 782 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 TMEM30AQ9NV96 361 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 TMEM59LQ9UK28 342 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 AMFRQ9UKV5 643 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 ZMYND8Q9ULU4 1186 aaPredicted RBP13.39□□□□□ -0.27
DDX39A-202ENST00000324340 INSL6Q9Y581 213 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 SAR1BQ9Y6B6 198 aa13.39□□□□□ -0.27
DDX39A-202ENST00000324340 HHLA1C9JL84 531 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 PAPSS1O43252 624 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-202ENST00000324340 NCK2O43639 380 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 AP1G2O75843 785 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 KIAA0754O94854 1291 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 PROSCO94903 275 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 SOD2P04179 222 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 KRT3P12035 628 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 TCP1P17987 556 aaKnown RBP13.38□□□□□ -0.27
DDX39A-202ENST00000324340 COMTP21964 271 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 PPM1AP35813 382 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 FNTAP49354 379 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 RGS7P49802 495 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 CACNA2D1P54289 1103 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 SLC6A3Q01959 620 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 ZNF252P-AS1Q0IIN9 211 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 SMARCB1Q12824 385 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 MESDQ14696 234 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 CRYMQ14894 314 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 USP41Q3LFD5 358 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 WLSQ5T9L3 541 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 ALS2CLQ60I27 953 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 CCDC70Q6NSX1 233 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 ARCQ7LC44 396 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 DDX53Q86TM3 631 aaKnown RBP13.38□□□□□ -0.27
DDX39A-202ENST00000324340 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 GPR65Q8IYL9 337 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 NIPA2Q8N8Q9 360 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 PIK3R5Q8WYR1 880 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 CD101Q93033 1021 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 BTBD6Q96KE9 485 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 B3GALT6Q96L58 329 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 MCEEQ96PE7 176 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 LBHD1Q9BQE6 289 aaPredicted RBP13.38□□□□□ -0.27
DDX39A-202ENST00000324340 HERC2P3Q9BVR0 1158 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 MTIF3Q9H2K0 278 aaKnown RBP13.38□□□□□ -0.27
DDX39A-202ENST00000324340 AAASQ9NRG9 546 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 SPG21Q9NZD8 308 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 MTRRQ9UBK8 725 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 STK39Q9UEW8 545 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 IP6K2Q9UHH9 426 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 HYOU1Q9Y4L1 999 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 BACE2Q9Y5Z0 518 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 SLC4A7Q9Y6M7 1214 aa13.38□□□□□ -0.27
DDX39A-202ENST00000324340 MIF4GDA9UHW6 222 aaKnown RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 GOLGA8SH3BPF8 625 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 CES2O00748 559 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 GJB6O95452 261 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 OR4Q2P0C623 313 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 RFC1P35251 1148 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 MAP3K7CLP57077 242 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 IRX1P78414 480 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 OGDHQ02218 1023 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 DSG1Q02413 1049 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 GPR17Q13304 367 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 PIGHQ14442 188 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 RPS6KA1Q15418 735 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 SLC39A12Q504Y0 691 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 SPOUT1Q5T280 376 aaKnown RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 OR6B2Q6IFH4 312 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 DCUN1D2Q6PH85 259 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 SLC26A9Q7LBE3 791 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 SPATA2LQ8IUW3 424 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 SCUBE3Q8IX30 993 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 SCML4Q8N228 414 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 FIBCD1Q8N539 461 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 JOSD2Q8TAC2 188 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 DPF3Q92784 378 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 TMEM169Q96HH4 297 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 OSBPL9Q96SU4 736 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 KCNK16Q96T55 309 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 RAD9AQ99638 391 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 CAPS2Q9BXY5 557 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 DMAP1Q9NPF5 467 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 METTL5Q9NRN9 209 aaKnown RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 MCM8Q9UJA3 840 aa13.37□□□□□ -0.27
DDX39A-202ENST00000324340 PACSIN2Q9UNF0 486 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 COL4A4P53420 1690 aaPredicted RBP13.37□□□□□ -0.27
DDX39A-202ENST00000324340 CCDC189A1A4V9 331 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 GOLGA6CA6NDK9 693 aa13.36□□□□□ -0.27
DDX39A-202ENST00000324340 DDX3YO15523 660 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms