RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 STX5Q13190 355 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 SUGP1Q8IWZ8 645 aaKnown RBP11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 B4GALNT2Q8NHY0 566 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 CYP3A43Q9HB55 503 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 ITGA11Q9UKX5 1188 aa11.29□□□□□ -0.6
SNRNP200-201ENST00000323853 XPO1O14980 1071 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 PMPCBO75439 489 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FBXO21O94952 628 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 SERPIND1P05546 499 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 PTPN7P35236 360 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 RPL21P46778 160 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FBXW4P57775 412 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 TMC3Q7Z5M5 1100 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 TRMT6Q9UJA5 497 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 ARIH2O95376 493 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 APOA1P02647 267 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 MPOP05164 745 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 AQP5P55064 265 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 PDPK2PQ6A1A2 396 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 C3orf67Q6ZVT6 689 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FBXO16Q8IX29 292 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 SGF29Q96ES7 293 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 SCUBE2Q9NQ36 999 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 ABI2Q9NYB9 513 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 SLITRK3O94933 977 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 PSMA4P25789 261 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FUT11Q495W5 492 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 TDRD5Q8NAT2 981 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 PCDH9Q9HC56 1237 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 DMGDHQ9UI17 866 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 PCDHA3Q9Y5H8 950 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 CYP2F1P24903 491 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 MEA1Q16626 185 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 SGO1Q5FBB7 561 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 EIF3LQ9Y262 564 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 C2orf81A6NN90 581 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 MAP3K6O95382 1288 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 STRA8Q7Z7C7 330 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 OTULINQ96BN8 352 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 ZNF711Q9Y462 761 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 GTF2A2P52657 109 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 FICDQ9BVA6 458 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 ZCWPW1Q9H0M4 648 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 V9GYQ6 96 aa11.28□□□□□ -0.6
SNRNP200-201ENST00000323853 GPR182O15218 404 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 HNRNPCP07910 306 aaKnown RBP eCLIP11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 FAM153BP0C7A2 387 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 FAM153CQ494X1 144 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 SPDYCQ5MJ68 293 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 ERMARDQ5T6L9 678 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 OLFML2BQ68BL8 750 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 STX19Q8N4C7 294 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 DNERQ8NFT8 737 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 NUDT12Q9BQG2 462 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 TBC1D23Q9NUY8 699 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 SCN3BQ9NY72 215 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 FAM153AQ9UHL3 310 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 AK9Q5TCS8 1911 aa11.27□□□□□ -0.6
SNRNP200-201ENST00000323853 HEATR9A2RTY3 570 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 ENO4A6NNW6 628 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 SKAP2O75563 359 aaPredicted RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 KPNB1Q14974 876 aaKnown RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 RASA2Q15283 850 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 BNC2Q6ZN30 1099 aaPredicted RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 OTOP1Q7RTM1 612 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 WWOXQ9NZC7 414 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 FAM95CA0A1B0GW59 222 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 DNALI1O14645 258 aaPredicted RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 PTPN4P29074 926 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 NIPA1Q7RTP0 329 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 SH3RF1Q7Z6J0 888 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 BLOC1S5Q8TDH9 187 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 TMEM161AQ9NX61 479 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 APPL1Q9UKG1 709 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 PGK2P07205 417 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 ALDH1A3P47895 512 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 MMP14P50281 582 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 MRNIPQ6NTE8 343 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 NT5DC3Q86UY8 548 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 RXFP2Q8WXD0 754 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 HES6Q96HZ4 224 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 DRG1Q9Y295 367 aaKnown RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 SHPRHQ149N8 1683 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 GOLGA8TH3BQL2 631 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 H7C4K7 107 aa11.27□□□□□ -0.61
SNRNP200-201ENST00000323853 USP1O94782 785 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms