RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ELK3P41970 407 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 BNIP1Q12981 228 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 ZNF268Q14587 947 aaPredicted RBP15.84■□□□□ 0.13
VARS2-201ENST00000321897 NFIL3Q16649 462 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 FAM172AQ8WUF8 416 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 DTNBP1Q96EV8 351 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 ZNF184Q99676 751 aaPredicted RBP15.84■□□□□ 0.13
VARS2-201ENST00000321897 PIDD1Q9HB75 910 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 USP18Q9UMW8 372 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 MYO9BQ13459 2157 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 ROBO1Q9Y6N7 1651 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 LCA5LO95447 670 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 FDX1P10109 184 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 PYGBP11216 843 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 RBP5P82980 135 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 SLC44A4Q53GD3 710 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 COBLL1Q53SF7 1204 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 AFG3L2Q9Y4W6 797 aa15.84■□□□□ 0.13
VARS2-201ENST00000321897 DFFAO00273 331 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 GIPC1O14908 333 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 SP100P23497 879 aaPredicted RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 NDST1P52848 882 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 CAPSQ13938 189 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 ACAP1Q15027 740 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 BMT2Q1RMZ1 405 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 PDGFCQ9NRA1 345 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 KCNK1O00180 336 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 HNRNPRO43390 633 aaKnown RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 SMNDC1O75940 238 aaKnown RBP eCLIP15.83■□□□□ 0.123e-7■■□□□ 11.4
VARS2-201ENST00000321897 NUDT17P0C025 328 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 C6orf222P0C671 652 aaPredicted RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 GPD1P21695 349 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 RPS6KA3P51812 740 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 PTPN11Q06124 597 aaPredicted RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 MCL1Q07820 350 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 TCHHL1Q5QJ38 904 aaPredicted RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 PDCD6IPQ8WUM4 868 aaKnown RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 ZNF75CPQ92670 426 aaPredicted RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 NDNQ99608 321 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 CAAP1Q9H8G2 361 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 ERAP1Q9NZ08 941 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 ARHGAP10A1A4S6 786 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 NFICP08651 508 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 MAPTP10636 758 aaKnown RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 TCF4P15884 667 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 SULT1E1P49888 294 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 AQP5P55064 265 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 CYLC2Q14093 348 aaPredicted RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 EFTUD2Q15029 972 aaKnown RBP eCLIP15.83■□□□□ 0.126e-9■■■■■ 35
VARS2-201ENST00000321897 JOSD2Q8TAC2 188 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 HDAC11Q96DB2 347 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 GORASP1Q9BQQ3 440 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 C17orf75Q9HAS0 396 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 PFDN4Q9NQP4 134 aa15.83■□□□□ 0.12
VARS2-201ENST00000321897 MYO5AQ9Y4I1 1855 aaKnown RBP15.83■□□□□ 0.12
VARS2-201ENST00000321897 HMBSP08397 361 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 SCNN1BP51168 640 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 RIPK1Q13546 671 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 CCNG2Q16589 344 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 CWF19L1Q69YN2 538 aaKnown RBP15.82■□□□□ 0.12
VARS2-201ENST00000321897 BTBD10Q9BSF8 475 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 MTO1Q9Y2Z2 717 aaKnown RBP15.82■□□□□ 0.12
VARS2-201ENST00000321897 NR2E3Q9Y5X4 410 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 SLC26A4O43511 780 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 PSMG1O95456 288 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 MIPP30301 263 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 GCNT1Q02742 428 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 PCSK7Q16549 785 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 WASHC2DQ5SRD0 308 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 SPOUT1Q5T280 376 aaKnown RBP15.82■□□□□ 0.12
VARS2-201ENST00000321897 TREML2Q5T2D2 321 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 ARMCX2Q7L311 632 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 MAGEC3Q8TD91 643 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 HELQQ8TDG4 1101 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 DPP3Q9NY33 737 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 SNTG2Q9NY99 539 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 TSPAN16Q9UKR8 245 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 A0A1W2PPM1 405 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 E5RJQ4 531 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 EDIL3O43854 480 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 CYP2C9P11712 490 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 JAM2P57087 298 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 STX3Q13277 289 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 VGLL4Q14135 290 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 KHDC1Q4VXA5 237 aaKnown RBP15.82■□□□□ 0.12
VARS2-201ENST00000321897 RIBC1Q8N443 379 aaPredicted RBP15.82■□□□□ 0.12
VARS2-201ENST00000321897 SLC7A14Q8TBB6 771 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 THAP11Q96EK4 314 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 SLC5A4Q9NY91 659 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 EPS15L1Q9UBC2 864 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 TJP2Q9UDY2 1190 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 NUDT5Q9UKK9 219 aa15.82■□□□□ 0.12
VARS2-201ENST00000321897 MYH15Q9Y2K3 1946 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 LACTBL1A8MY62 500 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 CHRNB2P17787 502 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 GARSP41250 739 aaKnown RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 MPZL3Q6UWV2 235 aa15.81■□□□□ 0.12
VARS2-201ENST00000321897 PDZD4Q76G19 769 aaPredicted RBP15.81■□□□□ 0.12
VARS2-201ENST00000321897 PPIL6Q8IXY8 311 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms