RNA–Protein interactions for RNA: ENST00000320580.8

PACS1-201, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PACS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-201ENST00000320580 KYQ8NBH2 561 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 FAM84BQ96KN1 310 aaPredicted RBP17.23■□□□□ 0.35
PACS1-201ENST00000320580 WDR11Q9BZH6 1224 aa17.23■□□□□ 0.35
PACS1-201ENST00000320580 ERVV-1B6SEH8 477 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 JAK1P23458 1154 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 SERPINB10P48595 397 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 PDK1Q15118 436 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 CCDC153Q494R4 210 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 GPR107Q5VW38 600 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 DNAAF3Q8N9W5 541 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 TMEM35BQ8NCS4 154 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 MCEEQ96PE7 176 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 MYH6P13533 1939 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 KRT7P08729 469 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 ATP2B4P23634 1241 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 NOP9Q86U38 636 aaKnown RBP17.22■□□□□ 0.35
PACS1-201ENST00000320580 ELMO3Q96BJ8 720 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 BTBD9Q96Q07 612 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 THAP1Q9NVV9 213 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 SCHIP1Q9P0W5 487 aaPredicted RBP17.22■□□□□ 0.35
PACS1-201ENST00000320580 PCDHGA4Q9Y5G9 962 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 PSTPIP1O43586 416 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 PROSCO94903 275 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 APOA1P02647 267 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 KCNA4P22459 653 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 FASTKD1Q53R41 847 aaKnown RBP17.22■□□□□ 0.35
PACS1-201ENST00000320580 ZFP1Q6P2D0 407 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 SEC14L1Q92503 715 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
PACS1-201ENST00000320580 ESYT2A0FGR8 921 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 CCDC103Q8IW40 242 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 LINC00116Q8NCU8 138 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 BHLHE22Q8NFJ8 381 aaPredicted RBP17.21■□□□□ 0.35
PACS1-201ENST00000320580 DHX38Q92620 1227 aaKnown RBP17.21■□□□□ 0.35
PACS1-201ENST00000320580 PANX3Q96QZ0 392 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 NACA2Q9H009 215 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 KCTD10Q9H3F6 313 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 CALB1P05937 261 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 TFDP2Q14188 446 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 KIF19Q2TAC6 998 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 PPP6R3Q5H9R7 873 aaPredicted RBP17.21■□□□□ 0.35
PACS1-201ENST00000320580 POLNQ7Z5Q5 900 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.21■□□□□ 0.35
PACS1-201ENST00000320580 ZFYVE19Q96K21 471 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 C6orf203Q9P0P8 240 aaPredicted RBP17.21■□□□□ 0.35
PACS1-201ENST00000320580 SLIT3O75094 1523 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 TAF4O00268 1085 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 AP3B2Q13367 1082 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 RALGPS1Q5JS13 557 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 PPP1R18Q6NYC8 613 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 FBXW8Q8N3Y1 598 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 ZCCHC7Q8N3Z6 543 aaKnown RBP17.21■□□□□ 0.35
PACS1-201ENST00000320580 PHC3Q8NDX5 983 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 SLC4A9Q96Q91 983 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 SH3GL1Q99961 368 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 FAM213AQ9BRX8 229 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 PSMD13Q9UNM6 376 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 TMED5Q9Y3A6 229 aa17.21■□□□□ 0.35
PACS1-201ENST00000320580 EIF3DO15371 548 aaKnown RBP eCLIP17.21■□□□□ 0.34
PACS1-201ENST00000320580 KCNN4O15554 427 aa17.21■□□□□ 0.34
PACS1-201ENST00000320580 MFN2O95140 757 aa17.21■□□□□ 0.34
PACS1-201ENST00000320580 TFE3P19532 575 aaPredicted RBP17.21■□□□□ 0.34
PACS1-201ENST00000320580 NT5C2P49902 561 aa17.21■□□□□ 0.34
PACS1-201ENST00000320580 ALCAMQ13740 583 aa17.21■□□□□ 0.34
PACS1-201ENST00000320580 SCARA5Q6ZMJ2 495 aa17.21■□□□□ 0.34
PACS1-201ENST00000320580 EXD1Q8NHP7 514 aa17.21■□□□□ 0.34
PACS1-201ENST00000320580 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.34
PACS1-201ENST00000320580 EFCAB1Q9HAE3 211 aa17.21■□□□□ 0.34
PACS1-201ENST00000320580 FRMPD4Q14CM0 1322 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 KBTBD13C9JR72 458 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 PRPSAP2O60256 369 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 TFPTP0C1Z6 253 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 NLRP11P59045 1033 aaKnown RBP17.2■□□□□ 0.34
PACS1-201ENST00000320580 PTK2BQ14289 1009 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 RNF19BQ6ZMZ0 732 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 IFNEQ86WN2 208 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SNX32Q86XE0 403 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SCAIQ8N9R8 606 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SPATA18Q8TC71 538 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SHISA4Q96DD7 197 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 MTMR9Q96QG7 549 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SERPINA6P08185 405 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SERPINB9P50453 376 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 HAUS6Q7Z4H7 955 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 MAF1Q9H063 256 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.2■□□□□ 0.34
PACS1-201ENST00000320580 TMEM247A6NEH6 219 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SPTLC1O15269 473 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 NDUFB5O43674 189 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 T-ENOLP0DO92 83 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 GFAPP14136 432 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SLC1A6P48664 564 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 ENTPD1P49961 510 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SESN2P58004 480 aaPredicted RBP17.2■□□□□ 0.34
PACS1-201ENST00000320580 BFSP2Q13515 415 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 SYDE2Q5VT97 1194 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 CIAPIN1Q6FI81 312 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 KLHL35Q6PF15 583 aa17.2■□□□□ 0.34
PACS1-201ENST00000320580 TRPC7Q9HCX4 862 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms