RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 HMGCRP04035 888 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 CAPRIN1Q14444 709 aaKnown RBP17.09■□□□□ 0.33
CLIP4-201ENST00000320081 RRP1BQ14684 758 aaKnown RBP17.09■□□□□ 0.33
CLIP4-201ENST00000320081 TMEM132BQ14DG7 1078 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 DGKDQ16760 1214 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 NOTUMQ6P988 496 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 AGGF1Q8N302 714 aaeCLIP17.09■□□□□ 0.33
CLIP4-201ENST00000320081 RDM1Q8NG50 284 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 ULK4Q96C45 1275 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 ACSS2Q9NR19 701 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 TJP2Q9UDY2 1190 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 MYH10P35580 1976 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 YDJCA8MPS7 323 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 SLC26A4O43511 780 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 KCNA2P16389 499 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 KCNA3P22001 575 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 TAF6P49848 677 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 PLK1P53350 603 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 MAMLD1Q13495 774 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 POU6F1Q14863 301 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 CRY2Q49AN0 593 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 ANKRD20A4Q4UJ75 823 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 ANKRD20A2Q5SQ80 823 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 ANKRD20A1Q5TYW2 823 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 POLNQ7Z5Q5 900 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 FAM71AQ8IYT1 594 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 SPOCK2Q92563 424 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 NSL1Q96IY1 281 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 ZNF512Q96ME7 567 aaPredicted RBP17.09■□□□□ 0.33
CLIP4-201ENST00000320081 WRAP73Q9P2S5 460 aaPredicted RBP17.09■□□□□ 0.33
CLIP4-201ENST00000320081 CCDC130P13994 396 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 ALDH5A1P51649 535 aaPredicted RBP17.09■□□□□ 0.33
CLIP4-201ENST00000320081 XRRA1Q6P2D8 792 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 TFAP2DQ7Z6R9 452 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 OPTNQ96CV9 577 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 PGLYRP2Q96PD5 576 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 WDCPQ9H6R7 721 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 NFAT5O94916 1531 aa17.09■□□□□ 0.33
CLIP4-201ENST00000320081 AGPSO00116 658 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 CELF2O95319 508 aaKnown RBP17.08■□□□□ 0.33
CLIP4-201ENST00000320081 CYP3A4P08684 503 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 NUDT2P50583 147 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 TWF1Q12792 350 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 HSDL1Q3SXM5 330 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 TTC39BQ5VTQ0 682 aaPredicted RBP17.08■□□□□ 0.33
CLIP4-201ENST00000320081 EFCAB3Q8N7B9 438 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 RNF217Q8TC41 542 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 ASCC2Q9H1I8 757 aaPredicted RBP17.08■□□□□ 0.33
CLIP4-201ENST00000320081 ARHGEF38Q9NXL2 777 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 UTP6Q9NYH9 597 aaKnown RBP17.08■□□□□ 0.33
CLIP4-201ENST00000320081 CYP39A1Q9NYL5 469 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 GRID1Q9ULK0 1009 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 C3P01024 1663 aa17.08■□□□□ 0.33
CLIP4-201ENST00000320081 NCF1BA6NI72 391 aaPredicted RBP17.08■□□□□ 0.32
CLIP4-201ENST00000320081 NCF1CA8MVU1 366 aaPredicted RBP17.08■□□□□ 0.32
CLIP4-201ENST00000320081 CYB561D2O14569 222 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 TADA2AO75478 443 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 NCF1P14598 390 aaPredicted RBP17.08■□□□□ 0.32
CLIP4-201ENST00000320081 ESRRGP62508 458 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 ADIGQ0VDE8 80 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 LAMC2Q13753 1193 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 ITGA9Q13797 1035 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 CNGA3Q16281 694 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 SLC2A14Q8TDB8 520 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 BLOC1S5Q8TDH9 187 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 HES6Q96HZ4 224 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 TMEM120AQ9BXJ8 343 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 MRC1P22897 1456 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 DNALI1O14645 258 aaPredicted RBP17.08■□□□□ 0.32
CLIP4-201ENST00000320081 CST3P01034 146 aaPredicted RBP17.08■□□□□ 0.32
CLIP4-201ENST00000320081 CYP2F1P24903 491 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 SERPINB4P48594 390 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 KLC1Q07866 573 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 PDK1Q15118 436 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 TRPC7Q9HCX4 862 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.32
CLIP4-201ENST00000320081 CYP3A7-CYP3A51PA0A087WV96 503 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 MICAL2O94851 1124 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 VDRP11473 427 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 CYP3A7P24462 503 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 SPRP35270 261 aaPredicted RBP17.07■□□□□ 0.32
CLIP4-201ENST00000320081 THPOP40225 353 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 HSP90AA5PQ58FG0 334 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 WDR49Q8IV35 697 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 SPON1Q9HCB6 807 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 IARS2Q9NSE4 1012 aaKnown RBP17.07■□□□□ 0.32
CLIP4-201ENST00000320081 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.07■□□□□ 0.32
CLIP4-201ENST00000320081 SLC25A27O95847 323 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 PHEXP78562 749 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 VGLL4Q14135 290 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 EXOC3L1Q86VI1 746 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 FUKQ8N0W3 1084 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 CDCA5Q96FF9 252 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 GTF2BQ00403 316 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
CLIP4-201ENST00000320081 KCNT2Q6UVM3 1135 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 PIF1Q9H611 641 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 MOSPD1Q9UJG1 213 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 ATP8B3O60423 1300 aa17.07■□□□□ 0.32
CLIP4-201ENST00000320081 SUPT3HO75486 399 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms