RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 FAM153AQ9UHL3 310 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 LRFN2Q9ULH4 789 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 HPCAL4Q9UM19 191 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 TRAPPC3O43617 180 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 HSF2BPO75031 334 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 FBXO21O94952 628 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 OR1G1P47890 313 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 LMNB2Q03252 620 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 ADCY2Q08462 1091 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 PPP1R7Q15435 360 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 C1orf53Q5VUE5 145 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 DRICH1Q6PGQ1 229 aaPredicted RBP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 SIX6OS1Q8N1H7 587 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 HSPH1Q92598 858 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 CENPIQ92674 756 aaPredicted RBP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 TBCBQ99426 244 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 SMOQ99835 787 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 C11orf84Q9BUA3 381 aaPredicted RBP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 NGRNQ9NPE2 291 aaKnown RBP17.51■□□□□ 0.39
CLCF1-201ENST00000312438 SNX24Q9Y343 169 aa17.51■□□□□ 0.39
CLCF1-201ENST00000312438 HOXA2O43364 376 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 B4GALT3O60512 393 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 ENDOD1O94919 500 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 GAS8O95995 478 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 MATKP42679 507 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
CLCF1-201ENST00000312438 TKTL1P51854 596 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 YWHAZP63104 245 aaKnown RBP17.5■□□□□ 0.39
CLCF1-201ENST00000312438 YWHAHQ04917 246 aaPredicted RBP17.5■□□□□ 0.39
CLCF1-201ENST00000312438 ADCY1Q08828 1119 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 FAAP100Q0VG06 881 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 SCYL2Q6P3W7 929 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 MAP7D3Q8IWC1 876 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 MREGQ8N565 214 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 TEKT4Q8WW24 435 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 PEBP4Q96S96 227 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 KCNK16Q96T55 309 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 CSNK1G1Q9HCP0 422 aa17.5■□□□□ 0.39
CLCF1-201ENST00000312438 F8W810 466 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 TADA2AO75478 443 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 CXCL10P02778 98 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 TSPY1Q01534 308 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 PDK2Q15119 407 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 RAB41Q5JT25 222 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 CYP4V2Q6ZWL3 525 aaPredicted RBP17.49■□□□□ 0.39
CLCF1-201ENST00000312438 TTC13Q8NBP0 860 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 ZMIZ2Q8NF64 920 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 MYLPFQ96A32 169 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 SCLYQ96I15 445 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 CASD1Q96PB1 797 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 PKMYT1Q99640 499 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 FRMD8P1Q9BZ68 369 aaPredicted RBP17.49■□□□□ 0.39
CLCF1-201ENST00000312438 NEUROG2Q9H2A3 272 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 CNGB3Q9NQW8 809 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 DRG1Q9Y295 367 aaKnown RBP17.49■□□□□ 0.39
CLCF1-201ENST00000312438 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 LIASO43766 372 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 NDUFV1P49821 464 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 CCL23P55773 120 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 HDAC4P56524 1084 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 KRT17Q04695 432 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 TLE2Q04725 743 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 KCTD19Q17RG1 926 aaPredicted RBP17.49■□□□□ 0.39
CLCF1-201ENST00000312438 RAB6CQ53S08 254 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 BBS12Q6ZW61 710 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 STRADAQ7RTN6 431 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 OR10T2Q8NGX3 314 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 FAM149B1Q96BN6 582 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 LRRC45Q96CN5 670 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 CCDC114Q96M63 670 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 MAK16Q9BXY0 300 aaKnown RBP17.49■□□□□ 0.39
CLCF1-201ENST00000312438 FAM129AQ9BZQ8 928 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 RAB6CQ9H0N0 254 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 DNAJB4Q9UDY4 337 aa17.49■□□□□ 0.39
CLCF1-201ENST00000312438 CST8O60676 142 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 OAZ2O95190 189 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 ALDH2P05091 517 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 NOS2P35228 1153 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 RPL21P46778 160 aaKnown RBP17.48■□□□□ 0.39
CLCF1-201ENST00000312438 ARSEP51690 589 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 CDH6P55285 790 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 BYSLQ13895 437 aaKnown RBP17.48■□□□□ 0.39
CLCF1-201ENST00000312438 SLC25A52Q3SY17 297 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 ALS2CLQ60I27 953 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 LRRTM3Q86VH5 581 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 VSIG1Q86XK7 387 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 DEFB106AQ8N104 65 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 CRIPAKQ8N1N5 446 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 ZNF333Q96JL9 665 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 CALN1Q9BXU9 219 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 NRDE2Q9H7Z3 1164 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 ZDHHC18Q9NUE0 388 aa17.48■□□□□ 0.39
CLCF1-201ENST00000312438 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.48■□□□□ 0.39
CLCF1-201ENST00000312438 PRG3Q9Y2Y8 225 aaPredicted RBP17.48■□□□□ 0.39
CLCF1-201ENST00000312438 MDM4O15151 490 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 DAB1O75553 588 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 CD48P09326 243 aa17.47■□□□□ 0.39
CLCF1-201ENST00000312438 HSPA9P38646 679 aaKnown RBP17.47■□□□□ 0.39
CLCF1-201ENST00000312438 CDR1P51861 262 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms