RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 GINS2Q9Y248 185 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 ZNF541Q9H0D2 1346 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 KIF13BQ9NQT8 1826 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 SIGLEC16A6NMB1 481 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 EXTL3O43909 919 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 PEX10O60683 326 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 CALB1P05937 261 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 KCNA4P22459 653 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 MMP8P22894 467 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 CDC16Q13042 620 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 PRKD1Q15139 912 aaPredicted RBP14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 CNPY1Q3B7I2 92 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 DACT2Q5SW24 774 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 CIAPIN1Q6FI81 312 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 TRIM72Q6ZMU5 477 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 GPATCH2LQ9NWQ4 482 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 SLC4A7Q9Y6M7 1214 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 C10orf71Q711Q0 1435 aa14.98□□□□□ -0.01
SCUBE2-201ENST00000309263 CXorf49A8MYA2 514 aaPredicted RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 RNASEH1O60930 286 aaKnown RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 ITGAVP06756 1048 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 MSX2P35548 267 aaPredicted RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 C1QBPQ07021 282 aaKnown RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 PPP6R3Q5H9R7 873 aaPredicted RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 THNSL1Q8IYQ7 743 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 TMEM130Q8N3G9 435 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 TTLL6Q8N841 843 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 DNAJC1Q96KC8 554 aaKnown RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 VCX3BQ9H321 246 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 OCEL1Q9H607 264 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 VCX3AQ9NNX9 186 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 OR6B1O95007 311 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 PROCP04070 461 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 RPL10AP62906 217 aaKnown RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 OLFML2BQ68BL8 750 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 CEP120Q8N960 986 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 ZNF398Q8TD17 642 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 SNCAIPQ9Y6H5 919 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 MYH9P35579 1960 aaKnown RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 ABLIM1O14639 778 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 TRPA1O75762 1119 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 TNFSF9P41273 254 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 PRKCEQ02156 737 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 PTP4A2Q12974 167 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 DPYSL3Q14195 570 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 STRIP1Q5VSL9 837 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 ATG16L1Q676U5 607 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 B3GNT9Q6UX72 402 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 TLE6Q9H808 572 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 DDX18Q9NVP1 670 aaKnown RBP14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 RHBDL2Q9NX52 303 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 TAGLN3Q9UI15 199 aa14.97□□□□□ -0.01
SCUBE2-201ENST00000309263 A0A0B4J269 797 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 ACO1P21399 889 aaKnown RBP14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 ROR1Q01973 937 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 BAATQ14032 418 aaPredicted RBP14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 DLGAP5Q15398 846 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 PHF13Q86YI8 300 aaPredicted RBP14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 NAT8LQ8N9F0 302 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 GCNAQ96QF7 691 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 ACSS2Q9NR19 701 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 CISHQ9NSE2 258 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 C4BPAP04003 597 aaKnown RBP14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 SRGAP2CP0DJJ0 459 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 CDH8P55286 799 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 PIGHQ14442 188 aaPredicted RBP14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 MTHFD1LQ6UB35 978 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 GATA6Q92908 595 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 SLC17A6Q9P2U8 582 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 DRG1Q9Y295 367 aaKnown RBP14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 GJA3Q9Y6H8 435 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 GMPRP36959 345 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 JAK3P52333 1124 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 STX3Q13277 289 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 KRT81Q14533 505 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 PGM5Q15124 567 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 NETO2Q8NC67 525 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 NR2E3Q9Y5X4 410 aa14.96□□□□□ -0.01
SCUBE2-201ENST00000309263 SNRPAP09012 282 aaKnown RBP14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 PEX2P28328 305 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 CRADDP78560 199 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 KRT76Q01546 638 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 SH3PXD2AQ5TCZ1 1133 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 LGSNQ5TDP6 509 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 VWA5B1Q5TIE3 1220 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 FAM160B2Q86V87 743 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 SATL1Q86VE3 508 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 MCF2L2Q86YR7 1114 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 ZNF276Q8N554 614 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 RNF148Q8N7C7 305 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 TFAP2BQ92481 460 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 ABTB1Q969K4 478 aaPredicted RBP14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 TRAPPC9Q96Q05 1148 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 NGRNQ9NPE2 291 aaKnown RBP14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 DDX56Q9NY93 547 aaKnown RBP14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 FEM1BQ9UK73 627 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 DNAJC16Q9Y2G8 782 aa14.95□□□□□ -0.02
SCUBE2-201ENST00000309263 A8MXQ7 604 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms