RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 HELZP42694 1942 aaKnown RBP18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 NFATC1O95644 943 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 EGFP01133 1207 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 GALK1P51570 392 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 NR1H3Q13133 447 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 CCDC40Q4G0X9 1142 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 TMEM196Q5HYL7 178 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 HECTD3Q5T447 861 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 GPRIN1Q7Z2K8 1008 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 FILIP1Q7Z7B0 1213 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 WHAMMQ8TF30 809 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 OVCA2Q8WZ82 227 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 TATDN2Q93075 761 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 HEXIM2Q96MH2 286 aaKnown RBP18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 HNRNPABQ99729 332 aaKnown RBP18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 P2RY13Q9BPV8 354 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 CCSER2Q9H7U1 834 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 FBRSL1Q9HCM7 1045 aaKnown RBP18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 C2orf42Q9NWW7 574 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 CTNND2Q9UQB3 1225 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 FRYLO94915 3013 aa18.02■□□□□ 0.48
HMGCLL1-202ENST00000308161 TRDMT1O14717 391 aaKnown RBP18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 COCHO43405 550 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 OLFM2O95897 454 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 IRF1P10914 325 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 NRLP54845 237 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 LRMPQ12912 555 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 PKN3Q6P5Z2 889 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 CLEC20AQ6ZU45 233 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 ZC3H3Q8IXZ2 948 aaKnown RBP18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 ZBTB44Q8NCP5 570 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 NELFBQ8WX92 580 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 EXOC4Q96A65 974 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 DHTKD1Q96HY7 919 aaPredicted RBP18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 FAM126AQ9BYI3 521 aaPredicted RBP18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 FBXO44Q9H4M3 255 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 CSNK1G1Q9HCP0 422 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 CISHQ9NSE2 258 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 FANCMQ8IYD8 2048 aa18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 EP300Q09472 2414 aaPredicted RBP18.01■□□□□ 0.47
HMGCLL1-202ENST00000308161 CHURC1-FNTBB4DL54 471 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 RNF40O75150 1001 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 TCF3P15923 654 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 ACO1P21399 889 aaKnown RBP18■□□□□ 0.47
HMGCLL1-202ENST00000308161 HOXC13P31276 330 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 FNTBP49356 437 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 STX17P56962 302 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 DMWDQ09019 674 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 LPAL2Q16609 132 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 PPP1R26Q5T8A7 1209 aaPredicted RBP18■□□□□ 0.47
HMGCLL1-202ENST00000308161 MAMSTRQ6ZN01 415 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 SYNPOQ8N3V7 929 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 DCLK2Q8N568 766 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 CD101Q93033 1021 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 COMMD8Q9NX08 183 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 NCDNQ9UBB6 729 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 SH3BP1Q9Y3L3 701 aa18■□□□□ 0.47
HMGCLL1-202ENST00000308161 CYP26A1O43174 497 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 TLR5O60602 858 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 TDGF1P13385 188 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 DRD1P21728 446 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 BMP6P22004 513 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 PPP1R2P41236 205 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 PGFP49763 221 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 DDX42Q86XP3 938 aaKnown RBP eCLIP17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 ELOA2Q8IYF1 753 aaPredicted RBP17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 SUMF1Q8NBK3 374 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 RUBCNQ92622 972 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 NELL1Q92832 810 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 SLC35C1Q96A29 364 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 METTL14Q9HCE5 456 aaKnown RBP17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 TLR8Q9NR97 1041 aaKnown RBP17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 IL37Q9NZH6 218 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 CHMP5Q9NZZ3 219 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 SMG5Q9UPR3 1016 aaKnown RBP17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 GVINP1Q7Z2Y8 2422 aa17.99■□□□□ 0.47
HMGCLL1-202ENST00000308161 PPP1R3GB7ZBB8 358 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 SLC9A3R1O14745 358 aaPredicted RBP17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 LILRB5O75023 590 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 CYP17A1P05093 508 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 MORC3Q14149 939 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 CAMK4Q16566 473 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 PRR23BQ6ZRT6 265 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 TTC39CQ8N584 583 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 TMEM176AQ96HP8 235 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 CEP63Q96MT8 703 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 DUSP9Q99956 384 aaKnown RBP17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 POLR3BQ9NW08 1133 aaPredicted RBP17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 GPR179Q6PRD1 2367 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 MYO16Q9Y6X6 1858 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 ATG2BQ96BY7 2078 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 BICDL2A1A5D9 508 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 FAM92AA1XBS5 289 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 HHLA1C9JL84 531 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 K7ESF4 209 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 TBX18O95935 607 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 ZDHHC11BP0C7U3 371 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 PXNP49023 591 aaPredicted RBP17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 TUBP50607 506 aa17.98■□□□□ 0.47
HMGCLL1-202ENST00000308161 RAD23BP54727 409 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms