RNA–Protein interactions for RNA: ENST00000307588.7

CCDC110-201, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC110, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-201ENST00000307588 PPP1R7Q15435 360 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 PLEKHG4Q58EX7 1191 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 FAM171BQ6P995 826 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 GLB1LQ6UWU2 654 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 DBF4BQ8NFT6 615 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 ART4Q93070 314 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 SUSD3Q96L08 255 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 KCNK16Q96T55 309 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 SEZ6LQ9BYH1 1024 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 RHOBTB2Q9BYZ6 727 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 ACBD3Q9H3P7 528 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 NGRNQ9NPE2 291 aaKnown RBP17.13■□□□□ 0.33
CCDC110-201ENST00000307588 SAE1Q9UBE0 346 aaPredicted RBP17.13■□□□□ 0.33
CCDC110-201ENST00000307588 CCL5P13501 91 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 ATXN1P54253 815 aaKnown RBP17.13■□□□□ 0.33
CCDC110-201ENST00000307588 TRIP13Q15645 432 aaPredicted RBP17.13■□□□□ 0.33
CCDC110-201ENST00000307588 ODF2Q5BJF6 829 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 ALS2CLQ60I27 953 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 PRUNE1Q86TP1 453 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 KCTD6Q8NC69 237 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 OR10T2Q8NGX3 314 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 HAUS1Q96CS2 278 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 TMEM209Q96SK2 561 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 DDX23Q9BUQ8 820 aaKnown RBP17.13■□□□□ 0.33
CCDC110-201ENST00000307588 TMLHEQ9NVH6 421 aa17.13■□□□□ 0.33
CCDC110-201ENST00000307588 ENPP3O14638 875 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 FAM200BP0CF97 657 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 HSD17B3P37058 310 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 MNX1P50219 401 aaPredicted RBP17.12■□□□□ 0.33
CCDC110-201ENST00000307588 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 BFSP2Q13515 415 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 OASLQ15646 514 aaKnown RBP17.12■□□□□ 0.33
CCDC110-201ENST00000307588 NOMO2Q5JPE7 1267 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 SYDE1Q6ZW31 735 aaPredicted RBP17.12■□□□□ 0.33
CCDC110-201ENST00000307588 BBS12Q6ZW61 710 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 GPRIN1Q7Z2K8 1008 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 LRRTM3Q86VH5 581 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 COLGALT2Q8IYK4 626 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 SPATA18Q8TC71 538 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 CCDC114Q96M63 670 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 FMO2Q99518 471 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 FTHL17Q9BXU8 183 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.12■□□□□ 0.33
CCDC110-201ENST00000307588 TBC1D13Q9NVG8 400 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 HHLA1C9JL84 531 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 PRPSAP2O60256 369 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 CST8O60676 142 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 IL4RP24394 825 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 FAM193AP78312 1265 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 GLIS1Q8NBF1 620 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 GRK7Q8WTQ7 553 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 SH3GL2Q99962 352 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 MED4Q9NPJ6 270 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 GPATCH2LQ9NWQ4 482 aa17.12■□□□□ 0.33
CCDC110-201ENST00000307588 TET1Q8NFU7 2136 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 POLR3GO15318 223 aaPredicted RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 PPFIA2O75334 1257 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 AP1G2O75843 785 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 KLRC2P26717 231 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 PCSK1P29120 753 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 MRPS5P82675 430 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 BYSLQ13895 437 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 DPYSL3Q14195 570 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 CA9Q16790 459 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 ZC3H12AQ5D1E8 599 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 INTS6LQ5JSJ4 861 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 OTUD1Q5VV17 481 aaPredicted RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 SLC35B2Q8TB61 432 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 MYLPFQ96A32 169 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 RNF208Q9H0X6 261 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 DYNLT1P63172 113 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 DHX9Q08211 1270 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 GPS2Q13227 327 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 RAB41Q5JT25 222 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 NKD2Q969F2 451 aaPredicted RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 TMEM161AQ9NX61 479 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 DNAJB4Q9UDY4 337 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 FEZ2Q9UHY8 353 aaPredicted RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 H0YGN5 161 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 NRP1O14786 923 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 PQBP1O60828 265 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 SLC8A3P57103 927 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 EFHC1Q5JVL4 640 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 SCYL2Q6P3W7 929 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 RHBDF2Q6PJF5 856 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 HFE2Q6ZVN8 426 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 FAM71BQ8TC56 605 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 TEKT4Q8WW24 435 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 TBCBQ99426 244 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 SNRNP25Q9BV90 132 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 MAGEB5Q9BZ81 275 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 EPB41L4BQ9H329 900 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 CSNK1G1Q9HCP0 422 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 WHRNQ9P202 907 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 DSEQ9UL01 958 aa17.11■□□□□ 0.33
CCDC110-201ENST00000307588 DRG1Q9Y295 367 aaKnown RBP17.11■□□□□ 0.33
CCDC110-201ENST00000307588 NFS1Q9Y697 457 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms