RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZNF624Q9P2J8 865 aaPredicted RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 BIVM-ERCC5R4GMW8 1640 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 PNMA8CA0A1B0GUJ8 204 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 FOXN3O00409 490 aaPredicted RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 FAM107AO95990 144 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ITGA4P13612 1032 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 RBBP4Q09028 425 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ZNF284Q2VY69 593 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 CLVS1Q8IUQ0 354 aaPredicted RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 C2orf69Q8N8R5 385 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 HIC2Q96JB3 615 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 PAPOLBQ9NRJ5 636 aaKnown RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 STK36Q9NRP7 1315 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 NUDT5Q9UKK9 219 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 GLI1P08151 1106 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ALOX15P16050 662 aaPredicted RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 PON1P27169 355 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 GRK3P35626 688 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 IFI35P80217 286 aaPredicted RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 CRYMQ14894 314 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 IQSEC1Q6DN90 963 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 LRIG3Q6UXM1 1119 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 CASP10Q92851 521 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 HPDLQ96IR7 371 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 SLC25A13Q9UJS0 675 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 A0A087X0T9 212 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 FAM228BP0C875 321 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 SPRP35270 261 aaPredicted RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 TRIM71Q2Q1W2 868 aaKnown RBP13.05□□□□□ -0.32
USP38-201ENST00000307017 AGBL2Q5U5Z8 902 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 PRR23CQ6ZRP0 262 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 FAM228AQ86W67 206 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 PPIL6Q8IXY8 311 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 TP53INP1Q96A56 240 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 FAM20AQ96MK3 541 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ACAD9Q9H845 621 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 CASTOR2A6NHX0 329 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 FSTL1Q12841 308 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 ITGADQ13349 1161 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 TBCELQ5QJ74 424 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 GRID1Q9ULK0 1009 aa13.05□□□□□ -0.32
USP38-201ENST00000307017 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 EVPLLA8MZ36 301 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 CLPTM1O96005 669 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
USP38-201ENST00000307017 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
USP38-201ENST00000307017 SEPT12Q8IYM1 358 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 IGDCC4Q8TDY8 1250 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 CDC42EP4Q9H3Q1 356 aaKnown RBP13.04□□□□□ -0.32
USP38-201ENST00000307017 HPS5Q9UPZ3 1129 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 SPOCD1Q6ZMY3 1216 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 TRMT6Q9UJA5 497 aaKnown RBP13.04□□□□□ -0.32
USP38-201ENST00000307017 SESN1Q9Y6P5 492 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 SLC2A4P14672 509 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 POU5F1Q01860 360 aaKnown RBP13.04□□□□□ -0.32
USP38-201ENST00000307017 VEPH1Q14D04 833 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 DENND1BQ6P3S1 775 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 C16orf59Q7L2K0 433 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 NT5MQ9NPB1 228 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 DDIT4Q9NX09 232 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 ERVK-7P63135 1459 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 IGSF1Q8N6C5 1336 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 INPP4BO15327 924 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 SLC1A1P43005 524 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
USP38-201ENST00000307017 KLHDC7AQ5VTJ3 777 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 ARMCX6Q7L4S7 300 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 RAD21L1Q9H4I0 556 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 CCDC167Q9P0B6 97 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 SH3BP4Q9P0V3 963 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 TAF4O00268 1085 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 CYBBP04839 570 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 MYLK2Q9H1R3 596 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 C2orf40Q9H1Z8 148 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 TMBIM4Q9HC24 238 aa13.04□□□□□ -0.32
USP38-201ENST00000307017 C2orf71A6NGG8 1288 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ZNF333Q96JL9 665 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 COPS4Q9BT78 406 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ARHGAP31Q2M1Z3 1444 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ZSCAN5DPP0CG00 497 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ACAT1P24752 427 aaKnown RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 RAD51Q06609 339 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 DOK6Q6PKX4 331 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 TRIM48Q8IWZ4 208 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 PAFAH2Q99487 392 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 FAM129AQ9BZQ8 928 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 MAP3K20Q9NYL2 800 aaKnown RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 SEPT3Q9UH03 358 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ARIH1Q9Y4X5 557 aaPredicted RBP13.03□□□□□ -0.32
USP38-201ENST00000307017 USP12O75317 370 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 ZNF286BP0CG31 522 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 HALP42357 657 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 SLC1A6P48664 564 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 RNF44Q7L0R7 432 aa13.03□□□□□ -0.32
USP38-201ENST00000307017 FAM131BQ86XD5 332 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms