RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 CBFA2T2O43439 604 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SRFP11831 508 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PSMC3P17980 439 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FCARP24071 287 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 WEE1P30291 646 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ACADSBP45954 432 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PSEN1P49768 467 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TKTL1P51854 596 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 KIF11P52732 1056 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ADIGQ0VDE8 80 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 HECTD3Q5T447 861 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TANGO2Q6ICL3 276 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 DPY19L2P1Q6NXN4 242 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CCDC186Q7Z3E2 898 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TADA2BQ86TJ2 420 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SLC47A2Q86VL8 602 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FAM71AQ8IYT1 594 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CELF5Q8N6W0 485 aaKnown RBP11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ARL14EPQ8N8R7 260 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TTC16Q8NEE8 873 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NOX5Q96PH1 765 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CDK5RAP1Q96SZ6 601 aaKnown RBP11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NAA15Q9BXJ9 866 aaKnown RBP11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SLC46A2Q9BY10 475 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TRPV4Q9HBA0 871 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ST7Q9NRC1 585 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TDP1Q9NUW8 608 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 OBP2AQ9NY56 170 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IL37Q9NZH6 218 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CHORDC1Q9UHD1 332 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NAGPAQ9UK23 515 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FBXL21Q9UKT6 434 aa11.58□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PI4K2BG5E9Z4 385 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TULP2O00295 520 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 EPHB6O15197 1021 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GFPT2O94808 682 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PRAMEF12O95522 483 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZBED1O96006 694 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CCDC172P0C7W6 258 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MBL2P11226 248 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RALAP11233 206 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 LCP1P13796 627 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 HDCP19113 662 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CLCN1P35523 988 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SOX5P35711 763 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 VIPR2P41587 438 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RGS7P49802 495 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TUBP50607 506 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SNX16P57768 344 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZXDAP98168 799 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PFKPQ01813 784 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GOLGA8FQ08AF8 430 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GOLGA8DPQ0D2H9 430 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GRM2Q14416 872 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZNF268Q14587 947 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PKDCCQ504Y2 493 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RAB41Q5JT25 222 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 VITQ6UXI7 678 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 DDX42Q86XP3 938 aaKnown RBP eCLIP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PASD1Q8IV76 773 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MFSD6LQ8IWD5 586 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SLC44A3Q8N4M1 653 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 BPIFB1Q8TDL5 484 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IPO4Q8TEX9 1081 aaKnown RBP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 KCTD13Q8WZ19 329 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GOLGA1Q92805 767 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 HSFY1Q96LI6 401 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NAP1L5Q96NT1 182 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ANP32EQ9BTT0 268 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TRMT61BQ9BVS5 477 aaKnown RBP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ULBP1Q9BZM6 244 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SMG9Q9H0W8 520 aaKnown RBP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 BRD9Q9H8M2 597 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ACP6Q9NPH0 428 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CNGB3Q9NQW8 809 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 THG1LQ9NWX6 298 aaKnown RBP11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 IFNKQ9P0W0 207 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PCDHGC3Q9UN70 934 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NCOR1O75376 2440 aa11.57□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 A0A1W2PQH9 124 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZNF263O14978 683 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SART1O43290 800 aaKnown RBP11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NARSO43776 548 aaKnown RBP11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TLR5O60602 858 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 FBXO21O94952 628 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 OAS1P00973 400 aaKnown RBP11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 COL4A2P08572 1712 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CYP11B1P15538 503 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 JAM2P57087 298 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 PLCB2Q00722 1185 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NR1I3Q14994 352 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SNX30Q5VWJ9 437 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 BTBD8Q5XKL5 378 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 DENND1BQ6P3S1 775 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RSRC2Q7L4I2 434 aaKnown RBP11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ZNF677Q86XU0 584 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MSANTD4Q8NCY6 345 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms