RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 E2F7Q96AV8 911 aa19.22■□□□□ 0.67
SPSB3-201ENST00000301717 FUCA2Q9BTY2 467 aa19.22■□□□□ 0.67
SPSB3-201ENST00000301717 DNAI2Q9GZS0 605 aa19.22■□□□□ 0.67
SPSB3-201ENST00000301717 GKN1Q9NS71 199 aa19.22■□□□□ 0.67
SPSB3-201ENST00000301717 NUDT5Q9UKK9 219 aa19.22■□□□□ 0.67
SPSB3-201ENST00000301717 MTF2Q9Y483 593 aaPredicted RBP19.22■□□□□ 0.67
SPSB3-201ENST00000301717 CPQQ9Y646 472 aa19.22■□□□□ 0.67
SPSB3-201ENST00000301717 ANAPC1Q9H1A4 1944 aa19.22■□□□□ 0.67
SPSB3-201ENST00000301717 ZNF638Q14966 1978 aaKnown RBP19.22■□□□□ 0.67
SPSB3-201ENST00000301717 ZNF318Q5VUA4 2279 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 A0A1W2PQH9 124 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 CHADO15335 359 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 COCHO43405 550 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 ZDHHC11BP0C7U3 371 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 ATP1A3P13637 1013 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 ARSAP15289 507 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 USP8P40818 1118 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 RGS7P49802 495 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 PFKPQ01813 784 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 SCD5Q86SK9 330 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 IRF7Q92985 503 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 LSM14BQ9BX40 385 aaKnown RBP19.21■□□□□ 0.67
SPSB3-201ENST00000301717 OBP2AQ9NY56 170 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 DNAJC12Q9UKB3 198 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.21■□□□□ 0.67
SPSB3-201ENST00000301717 SCML2Q9UQR0 700 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 WNT6Q9Y6F9 365 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 MUC6Q6W4X9 2439 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 MYH10P35580 1976 aa19.21■□□□□ 0.67
SPSB3-201ENST00000301717 PATJQ8NI35 1801 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 OTOL1A6NHN0 477 aaPredicted RBP19.2■□□□□ 0.66
SPSB3-201ENST00000301717 M0QYV0 167 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 MDM4O15151 490 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 GABBR2O75899 941 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 OLFM2O95897 454 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 DCNP07585 359 aaKnown RBP19.2■□□□□ 0.66
SPSB3-201ENST00000301717 MBL2P11226 248 aaPredicted RBP19.2■□□□□ 0.66
SPSB3-201ENST00000301717 RFX1P22670 979 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 AVPR2P30518 371 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 MFAP3P55082 362 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 USP4Q13107 963 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 ZNF268Q14587 947 aaPredicted RBP19.2■□□□□ 0.66
SPSB3-201ENST00000301717 MTF1Q14872 753 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 PKDCCQ504Y2 493 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 LCLAT1Q6UWP7 414 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 DHX40Q8IX18 779 aaKnown RBP19.2■□□□□ 0.66
SPSB3-201ENST00000301717 PDZD8Q8NEN9 1154 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 OVCA2Q8WZ82 227 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 DNASE1L2Q92874 299 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 SECISBP2LQ93073 1101 aaKnown RBP19.2■□□□□ 0.66
SPSB3-201ENST00000301717 WBP2Q969T9 261 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 FBXO44Q9H4M3 255 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 EBF3Q9H4W6 596 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 PNPLA8Q9NP80 782 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 HPS4Q9NQG7 708 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 HESX1Q9UBX0 185 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 ZMYM5Q9UJ78 669 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 ARHGAP26Q9UNA1 814 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 CNTN6Q9UQ52 1028 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 FHOD1Q9Y613 1164 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 PIAS3Q9Y6X2 628 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 COL4A2P08572 1712 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 F5P12259 2224 aa19.2■□□□□ 0.66
SPSB3-201ENST00000301717 LEFTY2O00292 366 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 XPO1O14980 1071 aaKnown RBP19.19■□□□□ 0.66
SPSB3-201ENST00000301717 TLR5O60602 858 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 LETM1O95202 739 aaPredicted RBP19.19■□□□□ 0.66
SPSB3-201ENST00000301717 ZNF18P17022 549 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 PPP3CCP48454 512 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 COPB1P53618 953 aaKnown RBP19.19■□□□□ 0.66
SPSB3-201ENST00000301717 BCAT1P54687 386 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 BST2Q10589 180 aaKnown RBP19.19■□□□□ 0.66
SPSB3-201ENST00000301717 ARHGAP29Q52LW3 1261 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 HECTD3Q5T447 861 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 ASTLQ6HA08 431 aaPredicted RBP19.19■□□□□ 0.66
SPSB3-201ENST00000301717 DENND1BQ6P3S1 775 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 ZFRQ96KR1 1074 aaKnown RBP19.19■□□□□ 0.66
SPSB3-201ENST00000301717 ULBP1Q9BZM6 244 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 LINC00597Q9H2U6 94 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 KIF9Q9HAQ2 790 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 COMMD8Q9NX08 183 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 USP3Q9Y6I4 520 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 TICRRQ7Z2Z1 1910 aa19.19■□□□□ 0.66
SPSB3-201ENST00000301717 SOBPA7XYQ1 873 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 IRF1P10914 325 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 GLULP15104 373 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 TKTL1P51854 596 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 STARD6P59095 220 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 SLC7A9P82251 487 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 ADIGQ0VDE8 80 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 UBXN2BQ14CS0 331 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 CNGA2Q16280 664 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 RAB41Q5JT25 222 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 SNX30Q5VWJ9 437 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 NAIF1Q69YI7 327 aaPredicted RBP19.18■□□□□ 0.66
SPSB3-201ENST00000301717 PMF1Q6P1K2 205 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 APTXQ7Z2E3 356 aaKnown RBP19.18■□□□□ 0.66
SPSB3-201ENST00000301717 CSGALNACT1Q8TDX6 532 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 SHC3Q92529 594 aa19.18■□□□□ 0.66
SPSB3-201ENST00000301717 FAM83CQ9BQN1 747 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms