RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 MPP2Q14168 576 aa10.56□□□□□ -0.72
FOXN4-201ENST00000299162 PIGHQ14442 188 aaPredicted RBP10.56□□□□□ -0.72
FOXN4-201ENST00000299162 RFX8Q6ZV50 586 aa10.56□□□□□ -0.72
FOXN4-201ENST00000299162 TAOK1Q7L7X3 1001 aa10.56□□□□□ -0.72
FOXN4-201ENST00000299162 SPOCK2Q92563 424 aa10.56□□□□□ -0.72
FOXN4-201ENST00000299162 FAM129AQ9BZQ8 928 aa10.56□□□□□ -0.72
FOXN4-201ENST00000299162 USP18Q9UMW8 372 aa10.56□□□□□ -0.72
FOXN4-201ENST00000299162 LCTP09848 1927 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 ATXN2Q99700 1313 aaKnown RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 HTTP42858 3142 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 A8MXQ7 604 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 TSPAN1O60635 241 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 MYL3P08590 195 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 RBP3P10745 1247 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 YY1P25490 414 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 CDKN2BP42772 138 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 AP3M2P53677 418 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 EIF3EP60228 445 aaKnown RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 TCEAL1Q15170 157 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 SURF1Q15526 300 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 FAM183BPQ6ZVS7 135 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 XYLT1Q86Y38 959 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 C12orf50Q8NA57 414 aaPredicted RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 NPLOC4Q8TAT6 608 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 VCPIP1Q96JH7 1222 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 C16orf70Q9BSU1 422 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 NSRP1Q9H0G5 558 aaKnown RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 RNF39Q9H2S5 420 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 CHMP2BQ9UQN3 213 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 PAPPA2Q9BXP8 1791 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 AGTP01019 485 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 CYP3A5P20815 502 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 EIF4BP23588 611 aaKnown RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 IGFBP6P24592 240 aaPredicted RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 SLC8A3P57103 927 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 CCL14Q16627 93 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 CEP41Q9BYV8 373 aa10.55□□□□□ -0.72
FOXN4-201ENST00000299162 ZMYND8Q9ULU4 1186 aaPredicted RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 TIMM13Q9Y5L4 95 aaPredicted RBP10.55□□□□□ -0.72
FOXN4-201ENST00000299162 ARID2Q68CP9 1835 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PRPSAP2O60256 369 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 DNAJC8O75937 253 aaPredicted RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CYP2C9P11712 490 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 ACVR2BQ13705 512 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PAN2Q504Q3 1202 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 FAM47CQ5HY64 1035 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 ERMARDQ5T6L9 678 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PMF1Q6P1K2 205 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 SLC30A9Q6PML9 568 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 TRMT10CQ7L0Y3 403 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 FBXO41Q8TF61 875 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PEBP4Q96S96 227 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 TSPAN18Q96SJ8 248 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CCDC77Q9BR77 488 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 TRIM56Q9BRZ2 755 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PHACTR1Q9C0D0 580 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CILPO75339 1184 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 RARBP10826 455 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 NEFHP12036 1026 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PROZP22891 400 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 KDELR1P24390 212 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 GBP1P32455 592 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 MAN1A1P33908 653 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 NUMBP49757 651 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 VCPP55072 806 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 TNFAIP2Q03169 654 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CCDC6Q16204 474 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PKN2Q16513 984 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CTU1Q7Z7A3 348 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PGM2Q96G03 612 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 NT5C1AQ9BXI3 368 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 HOMER3Q9NSC5 361 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 RGPD3A6NKT7 1758 aaPredicted RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 RGPD4Q7Z3J3 1758 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PDE4DIPQ5VU43 2346 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 DOCK3Q8IZD9 2030 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 DPPA5A6NC42 116 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 MAP3K13O43283 966 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 GAS2O43903 313 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 LSM8O95777 96 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 P4HA1P13674 534 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 LMO2P25791 158 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 MSH2P43246 934 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 MMP13P45452 471 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 RBP5P82980 135 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CNGA2Q16280 664 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 MSS51Q4VC12 460 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 ZNF484Q5JVG2 852 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CWF19L1Q69YN2 538 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 RHBDF2Q6PJF5 856 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 TRIM42Q8IWZ5 723 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CTAGE3PQ8IX95 158 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 FBF1Q8TES7 1133 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 PYROXD1Q8WU10 500 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CFAP36Q96G28 342 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 CNOT10Q9H9A5 744 aaKnown RBP10.54□□□□□ -0.72
FOXN4-201ENST00000299162 NKIRAS1Q9NYS0 192 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 STRIP2Q9ULQ0 834 aa10.54□□□□□ -0.72
FOXN4-201ENST00000299162 hCG_2014768A0A024R1R8 64 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms