RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 CCDC50Q8IVM0 306 aa19.39■□□□□ 0.7
SEC61A2-201ENST00000298428 RNF168Q8IYW5 571 aaPredicted RBP19.39■□□□□ 0.7
SEC61A2-201ENST00000298428 EXD1Q8NHP7 514 aa19.39■□□□□ 0.7
SEC61A2-201ENST00000298428 VN1R3Q9BXE9 311 aa19.39■□□□□ 0.7
SEC61A2-201ENST00000298428 EPC1Q9H2F5 836 aa19.39■□□□□ 0.7
SEC61A2-201ENST00000298428 PCDHB5Q9Y5E4 795 aa19.39■□□□□ 0.7
SEC61A2-201ENST00000298428 SART1O43290 800 aaKnown RBP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 TBC1D4O60343 1298 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 DAB1O75553 588 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 ZRANB2O95218 330 aaKnown RBP eCLIP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 KRT7P08729 469 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 RHOXF2BP0C7M4 288 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 MIPP30301 263 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 PTPN9P43378 593 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 EPHB4P54760 987 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 DAOAP59103 153 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 YWHAZP63104 245 aaKnown RBP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 SMC1AQ14683 1233 aaKnown RBP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 PRSS55Q6UWB4 352 aaPredicted RBP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 SLC13A5Q86YT5 568 aaPredicted RBP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 SLC39A11Q8N1S5 342 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 GPR161Q8N6U8 529 aaKnown RBP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 COLGALT1Q8NBJ5 622 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 TMEM169Q96HH4 297 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 PGLYRP2Q96PD5 576 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 RHOXF2Q9BQY4 288 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 ZWILCHQ9H900 591 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 KLHL11Q9NVR0 708 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 DDX56Q9NY93 547 aaKnown RBP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 USP18Q9UMW8 372 aa19.39■□□□□ 0.69
SEC61A2-201ENST00000298428 CARNS1A5YM72 827 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 GJB5O95377 273 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 ZBED1O96006 694 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 KRT1P04264 644 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 GLI1P08151 1106 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 USP17L7P0C7H9 530 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 SYN1P17600 705 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 IL1R2P27930 398 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 MATKP42679 507 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 ODF2Q5BJF6 829 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 TMEM240Q5SV17 173 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 VSTM1Q6UX27 236 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 RSPO2Q6UXX9 243 aaPredicted RBP19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 ADAT2Q7Z6V5 191 aaKnown RBP19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 SCN4BQ8IWT1 228 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 FAM172AQ8WUF8 416 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 RIN2Q8WYP3 895 aaPredicted RBP19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 RBM41Q96IZ5 413 aaKnown RBP19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 DDX23Q9BUQ8 820 aaKnown RBP19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 NGRNQ9NPE2 291 aaKnown RBP19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 PCSK1NQ9UHG2 260 aa19.38■□□□□ 0.69
SEC61A2-201ENST00000298428 GOLGA6L10A0A0M3HER8 536 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 CCDC188H7C350 402 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 GPR17Q13304 367 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 SMTNL2Q2TAL5 461 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 KIAA1841Q6NSI8 718 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 RCOR2Q8IZ40 523 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 DEFB106AQ8N104 65 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 ACSF2Q96CM8 615 aaPredicted RBP19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 POPDC2Q9HBU9 364 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 CXXC1Q9P0U4 656 aaPredicted RBP19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 YJEFN3A6XGL0 299 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 E7ENQ6 273 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 SOD2P04179 222 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 SMARCB1Q12824 385 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 LLGL1Q15334 1064 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 PSMD5Q16401 504 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 RAB6CQ53S08 254 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 KCNT1Q5JUK3 1230 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 CCDC70Q6NSX1 233 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 HFE2Q6ZVN8 426 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 ATAD1Q8NBU5 361 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 PIK3R5Q8WYR1 880 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 RNF25Q96BH1 459 aaPredicted RBP19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 KRT12Q99456 494 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 NCAPGQ9BPX3 1015 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 C11orf84Q9BUA3 381 aaPredicted RBP19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 HTATIP2Q9BUP3 242 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 RAB6CQ9H0N0 254 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 ANKZF1Q9H8Y5 726 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 CHST7Q9NS84 486 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 SPG21Q9NZD8 308 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 MTRRQ9UBK8 725 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 CDY1Q9Y6F8 540 aa19.37■□□□□ 0.69
SEC61A2-201ENST00000298428 PATJQ8NI35 1801 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 MTMR11A4FU01 709 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 PI4K2BG5E9Z4 385 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 TRIM66O15016 1216 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 PRPSAP2O60256 369 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 TRUB2O95900 331 aaKnown RBP19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 CETN2P41208 172 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 MAGEA11P43364 429 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 SLC5A3P53794 718 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 HTRA4P83105 476 aaPredicted RBP19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 DCAF6Q58WW2 860 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 C8orf74Q6P047 294 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 KLHL7Q8IXQ5 586 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 FBXO22Q8NEZ5 403 aa19.36■□□□□ 0.69
SEC61A2-201ENST00000298428 IRGQQ8WZA9 623 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms