RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 FNDC1Q4ZHG4 1894 aaPredicted RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 C2CD4BA6NLJ0 364 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 TMEM189-UBE2V1I3L0A0 370 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PDGFRAP16234 1089 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 LHX1P48742 406 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 VPS41P49754 854 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 SKOR1P84550 965 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PLCB3Q01970 1234 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 ADCY2Q08462 1091 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 DSC1Q08554 894 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 TUSC3Q13454 348 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PLEKHG4Q58EX7 1191 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 KCNT1Q5JUK3 1230 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 AGBL2Q5U5Z8 902 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 C1orf53Q5VUE5 145 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 TRNP1Q6NT89 227 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 FAM183BPQ6ZVS7 135 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PAQR9Q6ZVX9 377 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 TRMT10CQ7L0Y3 403 aaKnown RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 ANKRD33Q7Z3H0 272 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 KCTD6Q8NC69 237 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 B3GALNT2Q8NCR0 500 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 KCTD13Q8WZ19 329 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PKMYT1Q99640 499 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 C11orf84Q9BUA3 381 aaPredicted RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 FRMD8P1Q9BZ68 369 aaPredicted RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 PCSK1NQ9UHG2 260 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 DRG1Q9Y295 367 aaKnown RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 TULP2O00295 520 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PIK3R2O00459 728 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 PTPN1P18031 435 aaKnown RBP9.58□□□□□ -0.88
PDPN-201ENST00000294489 KDELR1P24390 212 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 IVDP26440 423 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 IL1R2P27930 398 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 MIPP30301 263 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 RGS7P49802 495 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 ITGA8P53708 1063 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 SLC29A2Q14542 456 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 WSCD1Q658N2 575 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 KDM7AQ6ZMT4 941 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 CEP128Q6ZU80 1094 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 RXFP2Q8WXD0 754 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 HSFY1Q96LI6 401 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 LPIN3Q9BQK8 851 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 SEMA4AQ9H3S1 761 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 WBP1LQ9NX94 342 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 DNPEPQ9ULA0 475 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 NEU2Q9Y3R4 380 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 DNAH12Q6ZR08 3092 aa9.58□□□□□ -0.88
PDPN-201ENST00000294489 SCN5AQ14524 2016 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CENPFP49454 3210 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 NDC80O14777 642 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 XPO1O14980 1071 aaKnown RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 SHOX2O60902 331 aaPredicted RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 NBNO60934 754 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 TKTP29401 623 aaKnown RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 SLC6A3Q01959 620 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 BFSP2Q13515 415 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 EMC10Q5UCC4 262 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CYP4V2Q6ZWL3 525 aaPredicted RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 FUKQ8N0W3 1084 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 NCAPGQ9BPX3 1015 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 RTP3Q9BQQ7 232 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 DUSP16Q9BY84 665 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 PCNTO95613 3336 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 PAPSS1O43252 624 aaPredicted RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 PRPSAP2O60256 369 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 TRUB2O95900 331 aaKnown RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 PDGFRBP09619 1106 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CCL5P13501 91 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CCDC130P13994 396 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 ACADSBP45954 432 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 VCPP55072 806 aaKnown RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 TIGD5Q53EQ6 642 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CLLU1OSQ5K130 101 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 RHBDF2Q6PJF5 856 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 DCLRE1AQ6PJP8 1040 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CMASQ8NFW8 434 aaPredicted RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 HSPH1Q92598 858 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 NKD2Q969F2 451 aaPredicted RBP9.57□□□□□ -0.88
PDPN-201ENST00000294489 PAAF1Q9BRP4 392 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CRTAC1Q9NQ79 661 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 CDH9Q9ULB4 789 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 MICAL3Q7RTP6 2002 aa9.57□□□□□ -0.88
PDPN-201ENST00000294489 RIPK2O43353 540 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 CST8O60676 142 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ENDOD1O94919 500 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 CXCL10P02778 98 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ITGAVP06756 1048 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 KLRC2P26717 231 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SDC4P31431 198 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ATP1A2P50993 1020 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ARSEP51690 589 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ZSCAN26Q16670 478 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 IZUMO3Q5VZ72 239 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 FAM171BQ6P995 826 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 BBS12Q6ZW61 710 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 SLC26A9Q7LBE3 791 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 BNIPLQ7Z465 357 aa9.56□□□□□ -0.88
PDPN-201ENST00000294489 ALLCQ8N6M5 410 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms