RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 CCL15-CCL14A0A0B4J2E2 113 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 A0A1B0GUA9 196 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 GEMIN4P57678 1058 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 SEPT7Q16181 437 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 CCL15Q16663 113 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 PCGF5Q86SE9 256 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 NETO2Q8NC67 525 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 FAF2Q96CS3 445 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 CFAP36Q96G28 342 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 NXF3Q9H4D5 531 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 ECT2Q9H8V3 914 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 UBN1Q9NPG3 1134 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 BTBD19C9JJ37 291 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 ADCY6O43306 1168 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 ELK3P41970 407 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 CCDC14Q49A88 953 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 CEP57Q86XR8 500 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 RIBC1Q8N443 379 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 FITM2Q8N6M3 262 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 MYCBPQ99417 103 aaPredicted RBP16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 GEMIN8Q9NWZ8 242 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 KLHL14Q9P2G3 628 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 BAIAP2L1Q9UHR4 511 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 ARL2BPQ9Y2Y0 163 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 NME7Q9Y5B8 376 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 NR2E3Q9Y5X4 410 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 BRCA2P51587 3418 aa16.5■□□□□ 0.23
NCKIPSD-201ENST00000294129 DYNC1LI2O43237 492 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 OAS1P00973 400 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 GHRP10912 638 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 LCP1P13796 627 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 CCDC130P13994 396 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 PHBP35232 272 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 KCNJ2P63252 427 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 SPARCL1Q14515 664 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 LCLAT1Q6UWP7 414 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 CYP4V2Q6ZWL3 525 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 LINC01465Q8N7H1 131 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 SGSM3Q96HU1 749 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 VTA1Q9NP79 307 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 SYNJ2BP-COX16A0A087WUM0 186 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 A8MXQ7 604 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 SDC4P31431 198 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 GBP2P32456 591 aaPredicted RBP16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 MSH2P43246 934 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 GABRB2P47870 512 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 GOLGA2P5Q9HBQ8 144 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 COX16Q9P0S2 106 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 SLC12A4Q9UP95 1085 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 STK38LQ9Y2H1 464 aa16.49■□□□□ 0.23
NCKIPSD-201ENST00000294129 ASMTLO95671 621 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 MGAT5Q09328 741 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 LRRC8CQ8TDW0 803 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 HESX1Q9UBX0 185 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 PHTF1Q9UMS5 762 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 C2CD2Q9Y426 696 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 KBTBD13C9JR72 458 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 MMP3P08254 477 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 ADRA1DP25100 572 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 RBL1P28749 1068 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 MAP2K2P36507 400 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 BCAR1P56945 870 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 RNASELQ05823 741 aaKnown RBP16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 INCA1Q0VD86 236 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 E2F5Q15329 346 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 CCDC142Q17RM4 750 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 CTAGE3PQ8IX95 158 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 TBC1D31Q96DN5 1066 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 SNRNP25Q9BV90 132 aaKnown RBP16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 EFR3BQ9Y2G0 817 aa16.48■□□□□ 0.23
NCKIPSD-201ENST00000294129 APRTP07741 180 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 MTFR1Q15390 333 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 SMAD1Q15797 465 aaKnown RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 SNCBQ16143 134 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 ZNF618Q5T7W0 954 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 SHCBP1Q8NEM2 672 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 CCDC110Q8TBZ0 833 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 NDRG1Q92597 394 aaKnown RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 RNF157Q96PX1 679 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 TRIM56Q9BRZ2 755 aaKnown RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 DHX35Q9H5Z1 703 aaKnown RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 SPON1Q9HCB6 807 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 GBA2Q9HCG7 927 aaPredicted RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 ACTL7BQ9Y614 415 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 DOCK3Q8IZD9 2030 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 PAPSS1O43252 624 aaPredicted RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 DNAJC8O75937 253 aaPredicted RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 ZBED1O96006 694 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 HOXA11P31270 313 aaPredicted RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 NR1H3Q13133 447 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 XRCC4Q13426 336 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 NOMO1Q15155 1222 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 USP50Q70EL3 339 aaPredicted RBP16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 ECHDC2Q86YB7 292 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 PLD5Q8N7P1 536 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 VRTNQ9H8Y1 702 aa16.47■□□□□ 0.23
NCKIPSD-201ENST00000294129 IKBKGQ9Y6K9 419 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms