RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ARIH2O95376 493 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PHKA2P46019 1235 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PSMC6P62333 389 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PRKCEQ02156 737 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 GRIK4Q16099 956 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 DUOXA2Q1HG44 320 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 HSDL1Q3SXM5 330 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 USP49Q70CQ1 688 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PID1Q7Z2X4 250 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PLD3Q8IV08 490 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 IFT43Q96FT9 208 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 TOX2Q96NM4 488 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 MANSC1Q9H8J5 431 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 MARCOQ9UEW3 520 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZMYND8Q9ULU4 1186 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 M0R3G1 203 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 HUS1O60921 280 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 MUTP22033 750 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 THPOP40225 353 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PMS1P54277 932 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 CATSPER4Q7RTX7 472 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 OR6P1Q8NGX9 317 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 E2F7Q96AV8 911 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 DNAJC7Q99615 494 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 PRPF18Q99633 342 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 UNC45AQ9H3U1 944 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 GRID1Q9ULK0 1009 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 COL1A2P08123 1366 aa12.3□□□□□ -0.44
SYNGAP1-201ENST00000293748 SMIM10L2AP0DMW4 78 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 SMIM10L2BP0DMW5 78 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 COMTP21964 271 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 SERPINB1P30740 379 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 DSG1Q02413 1049 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 FIGNQ5HY92 759 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 WLSQ5T9L3 541 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 C1orf228Q6PIY5 440 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 MDM1Q8TC05 714 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 RNF217Q8TC41 542 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 AGR3Q8TD06 166 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 CELF4Q9BZC1 486 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 TMBIM4Q9HC24 238 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 RAB6BQ9NRW1 208 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 KRT75O95678 551 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 PYGLP06737 847 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 APRTP07741 180 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 ITGA8P53708 1063 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 MAPK7Q13164 816 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 PIGHQ14442 188 aaPredicted RBP12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 RCN1Q15293 331 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 CASKIN2Q8WXE0 1202 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 HPS3Q969F9 1004 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 C18orf8Q96DM3 657 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 TMA16Q96EY4 203 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 AGO2Q9UKV8 859 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 LRFN2Q9ULH4 789 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 PPP1R3GB7ZBB8 358 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 WEE2P0C1S8 567 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 HLA-DPA1P20036 260 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 SESN2P58004 480 aaPredicted RBP12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 BEST2Q8NFU1 509 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 ZBED2Q9BTP6 218 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 FUCA2Q9BTY2 467 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 MRPL4Q9BYD3 311 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 PAK5Q9P286 719 aa12.29□□□□□ -0.44
SYNGAP1-201ENST00000293748 FAM205CA6NFA0 338 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 MYMKA6NI61 221 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 TBC1D4O60343 1298 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 EFCAB14O75071 495 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 ATP9AO75110 1047 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 CAND2O75155 1236 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 GHRP10912 638 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 COILP38432 576 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 HADHAP40939 763 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 CDK17Q00537 523 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 PATL1Q86TB9 770 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 ANKEF1Q9NU02 776 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 AP4S1Q9Y587 144 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 KCNN4O15554 427 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 PDE5AO76074 875 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 SRP72O76094 671 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 F2P00734 622 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 INSRRP14616 1297 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 NMT1P30419 496 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 NUP107P57740 925 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 KCNA1Q09470 495 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 AASDHQ4L235 1098 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 C3orf62Q6ZUJ4 267 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 CLEC4FQ8N1N0 589 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 KRT35Q92764 455 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 UBE2OQ9C0C9 1292 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 SETD4Q9NVD3 440 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 KCND2Q9NZV8 630 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 XPO7Q9UIA9 1087 aaKnown RBP12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 DTNAQ9Y4J8 743 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 H3BQF6 201 aa12.28□□□□□ -0.44
SYNGAP1-201ENST00000293748 AIM2O14862 343 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms