RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ARHGAP8P85298 464 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 KIAA1958Q8N8K9 716 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 OVCA2Q8WZ82 227 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 TAF4BQ92750 862 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 TWNKQ96RR1 684 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 APOBEC3GQ9HC16 384 aaKnown RBP26.77■■□□□ 1.88
U2AF1-201ENST00000291552 GDPD2Q9HCC8 539 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.77■■□□□ 1.88
U2AF1-201ENST00000291552 SEMA4GQ9NTN9 838 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 FRMD4BQ9Y2L6 1034 aa26.77■■□□□ 1.88
U2AF1-201ENST00000291552 FAM92AA1XBS5 289 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 MAPK13O15264 365 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 COCHO43405 550 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 AP1G2O75843 785 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 MBL2P11226 248 aaPredicted RBP26.76■■□□□ 1.87
U2AF1-201ENST00000291552 CHRM1P11229 460 aaPredicted RBP26.76■■□□□ 1.87
U2AF1-201ENST00000291552 NR2F2P24468 414 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 PIK3CAP42336 1068 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 PGFP49763 221 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 VAMP7P51809 220 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 PPP3CAQ08209 521 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 MESP2Q0VG99 397 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 NR1H3Q13133 447 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 ZCWPW2Q504Y3 356 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 SYT13Q7L8C5 426 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 ABCA7Q8IZY2 2146 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 CRYBG2Q8N1P7 616 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 PDZD8Q8NEN9 1154 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 SLC2A14Q8TDB8 520 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 GMIPQ9P107 970 aa26.76■■□□□ 1.87
U2AF1-201ENST00000291552 CNOT1A5YKK6 2376 aaKnown RBP26.76■■□□□ 1.87
U2AF1-201ENST00000291552 K7EQS6 105 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 RPP40O75818 363 aaKnown RBP26.75■■□□□ 1.87
U2AF1-201ENST00000291552 ZDHHC11BP0C7U3 371 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 DMC1Q14565 340 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 DHCR24Q15392 516 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 SNX30Q5VWJ9 437 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 KBTBD6Q86V97 674 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 SFTPA1Q8IWL2 248 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 ADGRG2Q8IZP9 1017 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 GUF1Q8N442 669 aaKnown RBP26.75■■□□□ 1.87
U2AF1-201ENST00000291552 CAMKK1Q8N5S9 505 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 C12orf29Q8N999 325 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 TAS1R2Q8TE23 839 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 EXOC4Q96A65 974 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 SCAND2PQ9GZW5 306 aaPredicted RBP26.75■■□□□ 1.87
U2AF1-201ENST00000291552 CCSER2Q9H7U1 834 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 FAM49BQ9NUQ9 324 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 CHORDC1Q9UHD1 332 aaPredicted RBP26.75■■□□□ 1.87
U2AF1-201ENST00000291552 CDV3Q9UKY7 258 aaKnown RBP26.75■■□□□ 1.87
U2AF1-201ENST00000291552 GTF3C3Q9Y5Q9 886 aa26.75■■□□□ 1.87
U2AF1-201ENST00000291552 NUP205Q92621 2012 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 P4HA1P13674 534 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 GCLMP48507 274 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 CSRP2Q16527 193 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 UNC93AQ86WB7 457 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 C12orf40Q86WS4 652 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 USP33Q8TEY7 942 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 WBP2Q969T9 261 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 ACDQ96AP0 544 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 CSNK1G1Q9HCP0 422 aa26.74■■□□□ 1.87
U2AF1-201ENST00000291552 ZNF202O95125 648 aa26.73■■□□□ 1.87
U2AF1-201ENST00000291552 INCA1Q0VD86 236 aa26.73■■□□□ 1.87
U2AF1-201ENST00000291552 RHBDF2Q6PJF5 856 aa26.73■■□□□ 1.87
U2AF1-201ENST00000291552 PRR23CQ6ZRP0 262 aa26.73■■□□□ 1.87
U2AF1-201ENST00000291552 GPRIN1Q7Z2K8 1008 aa26.73■■□□□ 1.87
U2AF1-201ENST00000291552 FAM186BQ8IYM0 893 aa26.73■■□□□ 1.87
U2AF1-201ENST00000291552 SMYD4Q8IYR2 804 aaPredicted RBP26.73■■□□□ 1.87
U2AF1-201ENST00000291552 LAMA1P25391 3075 aa26.72■■□□□ 1.87
U2AF1-201ENST00000291552 AXIN1O15169 862 aa26.72■■□□□ 1.87
U2AF1-201ENST00000291552 KIF20AO95235 890 aa26.72■■□□□ 1.87
U2AF1-201ENST00000291552 SLC6A11P48066 632 aa26.72■■□□□ 1.87
U2AF1-201ENST00000291552 SEC13P55735 322 aa26.72■■□□□ 1.87
U2AF1-201ENST00000291552 HECTD3Q5T447 861 aa26.72■■□□□ 1.87
U2AF1-201ENST00000291552 INTS8Q75QN2 995 aaKnown RBP26.72■■□□□ 1.87
U2AF1-201ENST00000291552 DDX42Q86XP3 938 aaKnown RBP eCLIP26.72■■□□□ 1.87
U2AF1-201ENST00000291552 WHAMMQ8TF30 809 aa26.72■■□□□ 1.87
U2AF1-201ENST00000291552 CCDC47Q96A33 483 aaKnown RBP26.72■■□□□ 1.87
U2AF1-201ENST00000291552 THADAQ6YHU6 1953 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 E2F8A0AVK6 867 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 SLC9A3R1O14745 358 aaPredicted RBP26.71■■□□□ 1.87
U2AF1-201ENST00000291552 GDF9O60383 454 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 EPN2O95208 641 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 SDHBP21912 280 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 TUBP50607 506 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 MAP3K7CLP57077 242 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 MCCD1P59942 119 aaPredicted RBP26.71■■□□□ 1.87
U2AF1-201ENST00000291552 CACNA2D4Q7Z3S7 1137 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 COMMD8Q9NX08 183 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 ATP6V1DQ9Y5K8 247 aa26.71■■□□□ 1.87
U2AF1-201ENST00000291552 HHLA1C9JL84 531 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 APBB3O95704 486 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 CCDC192P0DO97 292 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 ADORA2BP29275 332 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 ENPEPQ07075 957 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 CCDC6Q16204 474 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 C2orf27AQ580R0 203 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 CLEC20AQ6ZU45 233 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 PHTF2Q8N3S3 785 aa26.7■■□□□ 1.86
U2AF1-201ENST00000291552 RTKNQ9BST9 563 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms