RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 MBLAC1A4D2B0 266 aaPredicted RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 F8W8V4 182 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 CYP26A1O43174 497 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ATP5BP06576 529 aaKnown RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 CKBP12277 381 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 RAP1GDS1P52306 607 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 SH3BGRP55822 239 aaPredicted RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 DLG4P78352 724 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 GTF2BQ00403 316 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 SHHQ15465 462 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 DAB2IPQ5VWQ8 1189 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TRIM68Q6AZZ1 485 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TRAF7Q6Q0C0 670 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 MIER3Q7Z3K6 550 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 SDCCAG8Q86SQ7 713 aaPredicted RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 CHSY1Q86X52 802 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TPH2Q8IWU9 490 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 MCOLN2Q8IZK6 566 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TTC8Q8TAM2 541 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TRAPPC12Q8WVT3 735 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 AZIN2Q96A70 460 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 NSL1Q96IY1 281 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 VCPIP1Q96JH7 1222 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TMEM8AQ9HCN3 771 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 IL23AQ9NPF7 189 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 LARSQ9P2J5 1176 aaKnown RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 PSMC3IPQ9P2W1 217 aaPredicted RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 POLIQ9UNA4 740 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 SHOC2Q9UQ13 582 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 C2CD2Q9Y426 696 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 KAT6AQ92794 2004 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 MYH9P35579 1960 aaKnown RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ZBTB42B2RXF5 422 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 GSC2O15499 205 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ATMINO43313 823 aaPredicted RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ZNF862O60290 1169 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 IQCF3P0C7M6 154 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ACRP10323 421 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 SELPP16109 830 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 BRD2P25440 801 aaKnown RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TUBP50607 506 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 IGBP1P78318 339 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 SNX1Q13596 522 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 TAF1BQ53T94 588 aaPredicted RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 HHATQ5VTY9 493 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 LRRC8DQ7L1W4 858 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 SLC47A2Q86VL8 602 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 RHOT1Q8IXI2 618 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ARHGAP24Q8N264 748 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ZNF276Q8N554 614 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 BTBD6Q96KE9 485 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 MIPEPQ99797 713 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 HERPUD2Q9BSE4 406 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 HSPBP1Q9NZL4 362 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 IL1RAPL1Q9NZN1 696 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 ANAPC7Q9UJX3 599 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 GRID1Q9ULK0 1009 aa10.8□□□□□ -0.68
UPF3B-201ENST00000276201 MTO1Q9Y2Z2 717 aaKnown RBP10.8□□□□□ -0.68
UPF3B-201ENST00000276201 RRN3P2A6NIE6 340 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 MAGEC1O60732 1142 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 LYPLA2O95372 231 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 PSMG1O95456 288 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 PIM1P11309 404 aaPredicted RBP10.79□□□□□ -0.68
UPF3B-201ENST00000276201 CETN2P41208 172 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 GCLMP48507 274 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 PRKCEQ02156 737 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 GCNT1Q02742 428 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 GPNMBQ14956 572 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 SLC1A5Q15758 541 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 TMEM240Q5SV17 173 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 ZNF618Q5T7W0 954 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 SNX30Q5VWJ9 437 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 KRT39Q6A163 491 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 TRIM72Q6ZMU5 477 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 RNF217Q8TC41 542 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 PLEKHO2Q8TD55 490 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 NT5C1BQ96P26 610 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 KANSL3Q9P2N6 904 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 R3HDM2Q9Y2K5 976 aaKnown RBP10.79□□□□□ -0.68
UPF3B-201ENST00000276201 ARHGEF35A5YM69 484 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 FOXO6A8MYZ6 492 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 SMAPO00193 183 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 HBP1O60381 514 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 HAUS5O94927 633 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 TJP3O95049 919 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 RPA3P35244 121 aaPredicted RBP10.79□□□□□ -0.68
UPF3B-201ENST00000276201 THPOP40225 353 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 BPIFB4P59827 614 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 RPL26P61254 145 aaKnown RBP10.79□□□□□ -0.68
UPF3B-201ENST00000276201 MCL1Q07820 350 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 MBTPS1Q14703 1052 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 KHDC1Q4VXA5 237 aaKnown RBP10.79□□□□□ -0.68
UPF3B-201ENST00000276201 LRRC74BQ6ZQY2 392 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 KSR1Q8IVT5 923 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 DRAXINQ8NBI3 349 aaPredicted RBP10.79□□□□□ -0.68
UPF3B-201ENST00000276201 PPFIBP2Q8ND30 876 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 ATG4AQ8WYN0 398 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 KAT5Q92993 513 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 SKA1Q96BD8 255 aa10.79□□□□□ -0.68
UPF3B-201ENST00000276201 C9orf72Q96LT7 481 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms