RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 EZH1Q92800 747 aaPredicted RBP15.29■□□□□ 0.04
HMGN3-201ENST00000275036 FBXO32Q969P5 355 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 NT5C1AQ9BXI3 368 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 EPC1Q9H2F5 836 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 LINC00597Q9H2U6 94 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 POLR3BQ9NW08 1133 aaPredicted RBP15.29■□□□□ 0.04
HMGN3-201ENST00000275036 EHD2Q9NZN4 543 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 ARMCX3Q9UH62 379 aaPredicted RBP15.29■□□□□ 0.04
HMGN3-201ENST00000275036 ARHGAP26Q9UNA1 814 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 COQ4Q9Y3A0 265 aa15.29■□□□□ 0.04
HMGN3-201ENST00000275036 FAM92AA1XBS5 289 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 HHLA1C9JL84 531 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 STX10O60499 249 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 RTN3O95197 1032 aaPredicted RBP15.28■□□□□ 0.04
HMGN3-201ENST00000275036 ABL1P00519 1130 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 TCF3P15923 654 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 GJA4P35212 333 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 CXCL12P48061 93 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 PPP3CCP48454 512 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 PGFP49763 221 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 PDGFRLQ15198 375 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 EML3Q32P44 896 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 ZNF394Q53GI3 561 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 TMEM196Q5HYL7 178 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 DGKKQ5KSL6 1271 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 CLEC20AQ6ZU45 233 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 GPRIN1Q7Z2K8 1008 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 CCDC150Q8NCX0 1101 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 ATRIPQ8WXE1 791 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 CYFIP2Q96F07 1278 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
HMGN3-201ENST00000275036 ECT2Q9H8V3 914 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 DUS2Q9NX74 493 aaKnown RBP15.28■□□□□ 0.04
HMGN3-201ENST00000275036 CHORDC1Q9UHD1 332 aaPredicted RBP15.28■□□□□ 0.04
HMGN3-201ENST00000275036 CTNND2Q9UQB3 1225 aa15.28■□□□□ 0.04
HMGN3-201ENST00000275036 ANTXRLA6NF34 631 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 LEFTY2O00292 366 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.04
HMGN3-201ENST00000275036 SCAMP3O14828 347 aaKnown RBP15.27■□□□□ 0.04
HMGN3-201ENST00000275036 PAPSS2O95340 614 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-201ENST00000275036 EGFP01133 1207 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 FAM200BP0CF97 657 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 PFKLP17858 780 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 GALK1P51570 392 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 STX17P56962 302 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 SLC7A9P82251 487 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 SRSF5Q13243 272 aaKnown RBP15.27■□□□□ 0.04
HMGN3-201ENST00000275036 CAMK4Q16566 473 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 GAB4Q2WGN9 574 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 PPP1R26Q5T8A7 1209 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-201ENST00000275036 CC2D1AQ6P1N0 951 aaPredicted RBP15.27■□□□□ 0.04
HMGN3-201ENST00000275036 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 SLC4A11Q8NBS3 891 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 CEP63Q96MT8 703 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 CISHQ9NSE2 258 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 GMIPQ9P107 970 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 SMG5Q9UPR3 1016 aaKnown RBP15.27■□□□□ 0.04
HMGN3-201ENST00000275036 CPQQ9Y646 472 aa15.27■□□□□ 0.04
HMGN3-201ENST00000275036 MYO18AQ92614 2054 aaKnown RBP15.26■□□□□ 0.03
HMGN3-201ENST00000275036 CHURC1-FNTBB4DL54 471 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 PPP1R2P41236 205 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 FNTBP49356 437 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 PDE6CP51160 858 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 RAD23BP54727 409 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 SNX30Q5VWJ9 437 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 FOXR2Q6PJQ5 311 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 KIAA2013Q8IYS2 634 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 OVCA2Q8WZ82 227 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 RUBCNQ92622 972 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 JAKMIP2Q96AA8 810 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 ZFRQ96KR1 1074 aaKnown RBP15.26■□□□□ 0.03
HMGN3-201ENST00000275036 FAM126AQ9BYI3 521 aaPredicted RBP15.26■□□□□ 0.03
HMGN3-201ENST00000275036 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 COMMD8Q9NX08 183 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 SMPD4Q9NXE4 827 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 KIAA1468Q9P260 1216 aa15.26■□□□□ 0.03
HMGN3-201ENST00000275036 COCHO43405 550 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 IFNAR2P48551 515 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 FMO5P49326 533 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 PAK1Q13153 545 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 SYNPOQ8N3V7 929 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 CPA6Q8N4T0 437 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 UBR7Q8N806 425 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 MED15Q96RN5 788 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 METTL14Q9HCE5 456 aaKnown RBP15.25■□□□□ 0.03
HMGN3-201ENST00000275036 EML5Q05BV3 1969 aa15.25■□□□□ 0.03
HMGN3-201ENST00000275036 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 HRO43593 1189 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 RNF40O75150 1001 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 MBL2P11226 248 aaPredicted RBP15.24■□□□□ 0.03
HMGN3-201ENST00000275036 ANP32AP39687 249 aaKnown RBP15.24■□□□□ 0.03
HMGN3-201ENST00000275036 OPRD1P41143 372 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 MESP2Q0VG99 397 aa15.24■□□□□ 0.03
HMGN3-201ENST00000275036 GRSF1Q12849 480 aaKnown RBP eCLIP15.24■□□□□ 0.03
HMGN3-201ENST00000275036 LRMPQ12912 555 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms