RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 TFDP3Q5H9I0 405 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 ARCQ7LC44 396 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 FAM172AQ8WUF8 416 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 PIK3R5Q8WYR1 880 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 MYLPFQ96A32 169 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 VIPAS39Q9H9C1 493 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 UTP11Q9Y3A2 253 aaKnown RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 AGPSO00116 658 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 ACADSBP45954 432 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 INTS6LQ5JSJ4 861 aaKnown RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 RAB41Q5JT25 222 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 BHLHA9Q7RTU4 235 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 CTU1Q7Z7A3 348 aaKnown RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 MED10Q9BTT4 135 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 KRT7P08729 469 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 SPATA18Q8TC71 538 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 MAIP1Q8WWC4 291 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 ACBD6Q9BR61 282 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 ELAC1Q9H777 363 aaKnown RBP12.7□□□□□ -0.38
SDE2-201ENST00000272091 SNX24Q9Y343 169 aa12.7□□□□□ -0.38
SDE2-201ENST00000272091 LTBP2Q14767 1821 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 CXCL10P02778 98 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 COL6A1P12109 1028 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 PTPN9P43378 593 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 PITX1P78337 314 aaPredicted RBP12.69□□□□□ -0.38
SDE2-201ENST00000272091 CCNG2Q16589 344 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 HADHQ16836 314 aaKnown RBP12.69□□□□□ -0.38
SDE2-201ENST00000272091 TRIM60Q495X7 471 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 HFE2Q6ZVN8 426 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 BNIPLQ7Z465 357 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 HSPH1Q92598 858 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 CSNK1G1Q9HCP0 422 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 TMEM189-UBE2V1I3L0A0 370 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 NRP1O14786 923 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 LIASO43766 372 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 FAM200BP0CF97 657 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 IVDP26440 423 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 DRG2P55039 364 aaKnown RBP12.69□□□□□ -0.38
SDE2-201ENST00000272091 CA9Q16790 459 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 KRT222Q8N1A0 295 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 MREGQ8N565 214 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 DDX23Q9BUQ8 820 aaKnown RBP12.69□□□□□ -0.38
SDE2-201ENST00000272091 MAGEB5Q9BZ81 275 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 RAB17Q9H0T7 212 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 FAM114A2Q9NRY5 505 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 GPATCH2LQ9NWQ4 482 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 PCDHB8Q9UN66 801 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 CAPN15O75808 1086 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 AP1G2O75843 785 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 RNF8O76064 485 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 FYNP06241 537 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 MRPS5P82675 430 aaKnown RBP12.69□□□□□ -0.38
SDE2-201ENST00000272091 CBX1P83916 185 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 KRT17Q04695 432 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 MMRN1Q13201 1228 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 PRUNE1Q86TP1 453 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 ZNF333Q96JL9 665 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 TXLNGYQ9BZA5 131 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 DNPEPQ9ULA0 475 aa12.69□□□□□ -0.38
SDE2-201ENST00000272091 TYMPP19971 482 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 IL4RP24394 825 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 SDC4P31431 198 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 CCL23P55773 120 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 ZC3H12AQ5D1E8 599 aaKnown RBP12.68□□□□□ -0.38
SDE2-201ENST00000272091 RUNDC3BQ96NL0 473 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 ECEL1O95672 775 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 PCSK1P29120 753 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 HSPA9P38646 679 aaKnown RBP12.68□□□□□ -0.38
SDE2-201ENST00000272091 PTK6Q13882 451 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 DPYSL3Q14195 570 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 UAP1Q16222 522 aaPredicted RBP12.68□□□□□ -0.38
SDE2-201ENST00000272091 OVOS1Q6IE37 1185 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 GLIS1Q8NBF1 620 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 URGCPQ8TCY9 931 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 HAUS1Q96CS2 278 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 TBCBQ99426 244 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 NRDE2Q9H7Z3 1164 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.68□□□□□ -0.38
SDE2-201ENST00000272091 SAE1Q9UBE0 346 aaPredicted RBP12.68□□□□□ -0.38
SDE2-201ENST00000272091 CYP2C18P33260 490 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 SNX16P57768 344 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 HLTFQ14527 1009 aaKnown RBP eCLIP12.68□□□□□ -0.38
SDE2-201ENST00000272091 ZFYVE27Q5T4F4 411 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.68□□□□□ -0.38
SDE2-201ENST00000272091 SEPT8Q92599 483 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 NT5C3BQ969T7 300 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 SNRNP25Q9BV90 132 aaKnown RBP12.68□□□□□ -0.38
SDE2-201ENST00000272091 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 DNAI2Q9GZS0 605 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 NGRNQ9NPE2 291 aaKnown RBP12.68□□□□□ -0.38
SDE2-201ENST00000272091 DSEQ9UL01 958 aa12.68□□□□□ -0.38
SDE2-201ENST00000272091 DAB1O75553 588 aa12.67□□□□□ -0.38
SDE2-201ENST00000272091 TJP3O95049 919 aa12.67□□□□□ -0.38
SDE2-201ENST00000272091 SYF2O95926 243 aaKnown RBP12.67□□□□□ -0.38
SDE2-201ENST00000272091 TKTL1P51854 596 aa12.67□□□□□ -0.38
SDE2-201ENST00000272091 TLE2Q04725 743 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms