RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PIAS1O75925 651 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 NPTXRO95502 500 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 RBP3P10745 1247 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 PDGFRAP16234 1089 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 MNAT1P51948 309 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 ROR1Q01973 937 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 XRCC4Q13426 336 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 GRIK4Q16099 956 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 KYAT1Q16773 422 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 DARS2Q6PI48 645 aaKnown RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 C1orf228Q6PIY5 440 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 ZC3H18Q86VM9 953 aaKnown RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 ATP11CQ8NB49 1132 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 FBXO36Q8NEA4 188 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 SPATA18Q8TC71 538 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 SGSM3Q96HU1 749 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 C16orf70Q9BSU1 422 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 CNPY3Q9BT09 278 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 NT5C1AQ9BXI3 368 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 MAK16Q9BXY0 300 aaKnown RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 UBN1Q9NPG3 1134 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 GPATCH2LQ9NWQ4 482 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 XPO7Q9UIA9 1087 aaKnown RBP13.48□□□□□ -0.25
CPSF6-201ENST00000266679 PNMA3Q9UL41 463 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 ARL2BPQ9Y2Y0 163 aa13.48□□□□□ -0.25
CPSF6-201ENST00000266679 A0A1W2PPM1 405 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 C2CD4BA6NLJ0 364 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PPEF2O14830 753 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 HGSO14964 777 aaPredicted RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PRPF4O43172 522 aaKnown RBP eCLIP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PFKMP08237 780 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PHBP35232 272 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PCK1P35558 622 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 ATP11AP98196 1134 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 TMEM62Q0P6H9 643 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 KRT81Q14533 505 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 ACAP1Q15027 740 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 EFHC2Q5JST6 749 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 SYCP2LQ5T4T6 812 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 LCLAT1Q6UWP7 414 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 CYP4V2Q6ZWL3 525 aaPredicted RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 CCDC63Q8NA47 563 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 SLC24A2Q9UI40 661 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 RABGEF1Q9UJ41 708 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 GINS2Q9Y248 185 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 C2CD2Q9Y426 696 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 CEP290O15078 2479 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 H3BRB1 525 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PRPSAP2O60256 369 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 ASMTLO95671 621 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 RPA3P35244 121 aaPredicted RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 GEMIN4P57678 1058 aaKnown RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 DPYSL3Q14195 570 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 NOMO1Q15155 1222 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 MTFR1Q15390 333 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 SCYL2Q6P3W7 929 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PARP9Q8IXQ6 854 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PPP1R13LQ8WUF5 828 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 THOC1Q96FV9 657 aaKnown RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 RMDN2Q96LZ7 410 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 PARK7Q99497 189 aaKnown RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 MRPL45Q9BRJ2 306 aaKnown RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 TUT1Q9H6E5 874 aaKnown RBP13.47□□□□□ -0.25
CPSF6-201ENST00000266679 CD248Q9HCU0 757 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 FAM49BQ9NUQ9 324 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 GRID1Q9ULK0 1009 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 CHMP2BQ9UQN3 213 aa13.47□□□□□ -0.25
CPSF6-201ENST00000266679 H7C0C1 242 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 CA4P22748 312 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 GRM5P41594 1212 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 ATP5OP48047 213 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 CCNA1P78396 465 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
CPSF6-201ENST00000266679 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 SPARCL1Q14515 664 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 KIZQ2M2Z5 673 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 PPP1R26Q5T8A7 1209 aaPredicted RBP13.46□□□□□ -0.25
CPSF6-201ENST00000266679 ACOT1Q86TX2 421 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.46□□□□□ -0.25
CPSF6-201ENST00000266679 DENND1AQ8TEH3 1009 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 FBF1Q8TES7 1133 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 PITPNM3Q9BZ71 974 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 ECT2Q9H8V3 914 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 SNTG2Q9NY99 539 aa13.46□□□□□ -0.25
CPSF6-201ENST00000266679 SMG5Q9UPR3 1016 aaKnown RBP13.46□□□□□ -0.25
CPSF6-201ENST00000266679 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 RBM47A0AV96 593 aaKnown RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 SLC1A5Q15758 541 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 MARCH8Q5T0T0 291 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 C3orf62Q6ZUJ4 267 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 PALM2Q8IXS6 379 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 OR6J1Q8NGC5 347 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 EMID1Q96A84 441 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 PAFAH2Q99487 392 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 KATNBL1Q9H079 304 aa13.45□□□□□ -0.26
CPSF6-201ENST00000266679 FAM49AQ9H0Q0 323 aaPredicted RBP13.45□□□□□ -0.26
CPSF6-201ENST00000266679 NGRNQ9NPE2 291 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms