RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 FBXO6Q9NRD1 293 aaPredicted RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 SLC17A7Q9P2U7 560 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 APOBEC2Q9Y235 224 aaKnown RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 RPL22P35268 128 aaKnown RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 ZPBP2Q6X784 338 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 UNC45BQ8IWX7 931 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 RYBPQ8N488 228 aaPredicted RBP20.62■□□□□ 0.89
CSPG5-201ENST00000264723 PGBD4Q96DM1 585 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 TMEM176AQ96HP8 235 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 TMEM120AQ9BXJ8 343 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 ITGB4P16144 1822 aa20.62■□□□□ 0.89
CSPG5-201ENST00000264723 BNIP3LO60238 219 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 ZWINTO95229 277 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 UBTFL6P0CB48 400 aaPredicted RBP20.61■□□□□ 0.89
CSPG5-201ENST00000264723 GTF2A2P52657 109 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 SPDYCQ5MJ68 293 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 ANKRD20A2Q5SQ80 823 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 C1orf220Q5T0J3 134 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 ANKRD20A1Q5TYW2 823 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 TMEM154Q6P9G4 183 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 BZW1Q7L1Q6 419 aaKnown RBP20.61■□□□□ 0.89
CSPG5-201ENST00000264723 SCUBE3Q8IX30 993 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 CRYGNQ8WXF5 182 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 ZNF214Q9UL59 606 aaPredicted RBP20.61■□□□□ 0.89
CSPG5-201ENST00000264723 TOGARAM1Q9Y4F4 1720 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 NEMP1O14524 444 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 CD48P09326 243 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 GAD2Q05329 585 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 GRIK4Q16099 956 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 NFIL3Q16649 462 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 TRIM42Q8IWZ5 723 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 TBC1D10AQ9BXI6 508 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 FOXP3Q9BZS1 431 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 PCDH9Q9HC56 1237 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 TJP2Q9UDY2 1190 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 GIPC1O14908 333 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 B3GAT3O94766 335 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 NFICP08651 508 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 ISLR2Q6UXK2 745 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 TTC39CQ8N584 583 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 SLC7A14Q8TBB6 771 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 NSL1Q96IY1 281 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 TSC22D3Q99576 134 aa20.61■□□□□ 0.89
CSPG5-201ENST00000264723 ATRNL1Q5VV63 1379 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 SRRM3A6NNA2 597 aaPredicted RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 LGALS2P05162 132 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 SNRPAP09012 282 aaKnown RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 ACO1P21399 889 aaKnown RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 MFSD14CQ5VZR4 134 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 PRPF39Q86UA1 669 aaKnown RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 TRABD2AQ86V40 505 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 TTC8Q8TAM2 541 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 RSAD1Q9HA92 442 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 SPATS2LQ9NUQ6 558 aaKnown RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 HSPA4LO95757 839 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 CRADDP78560 199 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 BEX3Q00994 111 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 STX3Q13277 289 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 TAF5Q15542 800 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 CELF3Q5SZQ8 465 aaKnown RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 ANKRD22Q5VYY1 191 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 SLC39A4Q6P5W5 647 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 CES3Q6UWW8 571 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 GABPB2Q8TAK5 448 aaPredicted RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 E2F7Q96AV8 911 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 GEMIN8Q9NWZ8 242 aaKnown RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 TSPAN16Q9UKR8 245 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 NVLO15381 856 aaKnown RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 GSTA2P09210 222 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 FAM172AQ8WUF8 416 aa20.6■□□□□ 0.89
CSPG5-201ENST00000264723 PRG3Q9Y2Y8 225 aaPredicted RBP20.6■□□□□ 0.89
CSPG5-201ENST00000264723 USP2O75604 605 aaPredicted RBP20.59■□□□□ 0.89
CSPG5-201ENST00000264723 TRPA1O75762 1119 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 TSPY1Q01534 308 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 PIGWQ7Z7B1 504 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 C12orf56Q8IXR9 622 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 NAF1Q96HR8 494 aaKnown RBP20.59■□□□□ 0.89
CSPG5-201ENST00000264723 FAM155BO75949 473 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 UNC5CO95185 931 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 LBX2Q6XYB7 198 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 GMLQ99445 158 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 MECRQ9BV79 373 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 CPSF2Q9P2I0 782 aaKnown RBP20.59■□□□□ 0.89
CSPG5-201ENST00000264723 ZCCHC18P0CG32 403 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 SLC26A2P50443 739 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 DEUP1Q05D60 604 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 THEM5Q8N1Q8 247 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 ZNF536O15090 1300 aa20.59■□□□□ 0.89
CSPG5-201ENST00000264723 FARP2O94887 1054 aaPredicted RBP20.58■□□□□ 0.89
CSPG5-201ENST00000264723 WDR4P57081 412 aaKnown RBP20.58■□□□□ 0.89
CSPG5-201ENST00000264723 MCL1Q07820 350 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 ASPHQ12797 758 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 KYAT1Q16773 422 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 IL31Q6EBC2 164 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 C7orf43Q8WVR3 580 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 APOL2Q9BQE5 337 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 ZFATQ9P243 1243 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 CPSF3Q9UKF6 684 aaKnown RBP20.58■□□□□ 0.89
CSPG5-201ENST00000264723 MYPNQ86TC9 1320 aa20.58■□□□□ 0.89
CSPG5-201ENST00000264723 DFFAO00273 331 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms