RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 MRPL4Q9BYD3 311 aaKnown RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 NIFKQ9BYG3 293 aaKnown RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 GCOM2Q9BZD3 368 aaPredicted RBP9.96□□□□□ -0.82
SIM1-201ENST00000262901 ACP6Q9NPH0 428 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 INIPQ9NRY2 104 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 SIK3Q9Y2K2 1263 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 ARL2BPQ9Y2Y0 163 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 Q9Y3F1 56 aa9.96□□□□□ -0.82
SIM1-201ENST00000262901 CCT8L1PA6NM43 557 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 NOL3O60936 208 aaKnown RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 KRT3P12035 628 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 KRT10P13645 584 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 ATP4AP20648 1035 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 CLCN3P51790 818 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TRADDQ15628 312 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 MIIPQ5JXC2 388 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 CRLF3Q8IUI8 442 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 ZBTB8BQ8NAP8 495 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 MUC3BQ9H195 1237 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 MAFO75444 373 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 PGK1P00558 417 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 RRM1P23921 792 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 CTCFP49711 727 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 RGS7P49802 495 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 PSMD7P51665 324 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 MCCD1P59942 119 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 SNRPFP62306 86 aaKnown RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 COG7P83436 770 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 NFX1Q12986 1120 aaKnown RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 TFDP2Q14188 446 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 PDZD4Q76G19 769 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 CATSPER4Q7RTX7 472 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 ZFAND2BQ8WV99 257 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 SLC35C1Q96A29 364 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 FGD4Q96M96 766 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 ZSWIM1Q9BR11 485 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 KLC2Q9H0B6 622 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TMBIM4Q9HC24 238 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 PARVAQ9NVD7 372 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 COMMD8Q9NX08 183 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 SCOCQ9UIL1 159 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 CHMP2BQ9UQN3 213 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TRIM43BA6NCK2 446 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TISP43B9A030 160 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 DDX3XO00571 662 aaKnown RBP eCLIP9.95□□□□□ -0.82
SIM1-201ENST00000262901 PRKCBP05771 671 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 FOSL1P15407 271 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 ITIH2P19823 946 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TBXAS1P24557 533 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 NOP14P78316 857 aaKnown RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 NCOA4Q13772 614 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 DUOXA2Q1HG44 320 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 SLC47A2Q86VL8 602 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TAS1R2Q8TE23 839 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 ZNF296Q8WUU4 475 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 TRAPPC12Q8WVT3 735 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 GIMAP1Q8WWP7 306 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 MPP4Q96JB8 637 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TTC25Q96NG3 672 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 NR1H4Q96RI1 486 aaPredicted RBP9.95□□□□□ -0.82
SIM1-201ENST00000262901 SETD4Q9NVD3 440 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 SAGE1Q9NXZ1 904 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 TLK1Q9UKI8 766 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 L3MBTL1Q9Y468 752 aa9.95□□□□□ -0.82
SIM1-201ENST00000262901 ADGRA2Q96PE1 1338 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 OTOFQ9HC10 1997 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 SYF2O95926 243 aaKnown RBP9.94□□□□□ -0.82
SIM1-201ENST00000262901 APRTP07741 180 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 GPC3P51654 580 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 RTP1P59025 263 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 EIF3EP60228 445 aaKnown RBP9.94□□□□□ -0.82
SIM1-201ENST00000262901 KDSRQ06136 332 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 CAMK2BQ13554 666 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 STAT4Q14765 748 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 PPP1R2P3Q6NXS1 205 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 AADACL2Q6P093 401 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 HACE1Q8IYU2 909 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 TTC13Q8NBP0 860 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 PIP4K2CQ8TBX8 421 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 AENQ8WTP8 325 aaKnown RBP9.94□□□□□ -0.82
SIM1-201ENST00000262901 MED15Q96RN5 788 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 DHX35Q9H5Z1 703 aaKnown RBP9.94□□□□□ -0.82
SIM1-201ENST00000262901 GJD2Q9UKL4 321 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 PAIP2BQ9ULR5 123 aaKnown RBP9.94□□□□□ -0.82
SIM1-201ENST00000262901 TBX20Q9UMR3 447 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 PCDHB2Q9Y5E7 798 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 NRCAMQ92823 1304 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 SMCHD1A6NHR9 2005 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 CCDC78A2IDD5 438 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 PDLIM1O00151 329 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 MAP3K7O43318 606 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 KRT7P08729 469 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 PDGFRBP09619 1106 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 ANXA13P27216 316 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 SDC4P31431 198 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 MAGEA4P43358 317 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 SEPT6Q14141 434 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 MAP3K21Q5TCX8 1036 aa9.94□□□□□ -0.82
SIM1-201ENST00000262901 TRMT10CQ7L0Y3 403 aaKnown RBP9.94□□□□□ -0.82
SIM1-201ENST00000262901 ENOSF1Q7L5Y1 443 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms