RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 FBXO32Q969P5 355 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 SLITRK1Q96PX8 696 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 CNGB3Q9NQW8 809 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 SEPT11Q9NVA2 429 aaKnown RBP17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 SCML2Q9UQR0 700 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 DOCK6Q96HP0 2047 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 CLUHO75153 1309 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 GREB1Q4ZG55 1949 aa17.5■□□□□ 0.39
CHCHD3-201ENST00000262570 E5RJQ4 531 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 DDX3XO00571 662 aaKnown RBP eCLIP17.49■□□□□ 0.394e-12■■■■■ 33.5
CHCHD3-201ENST00000262570 NRG2O14511 850 aaPredicted RBP17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ZNF197O14709 1029 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 MOSPD3O75425 235 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 TADA3O75528 432 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ZBED1O96006 694 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 LCP1P13796 627 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 CDC25CP30307 473 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 CENPCQ03188 943 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 MAPK8IP2Q13387 824 aaPredicted RBP17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 PTPN20Q4JDL3 420 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 SIX6OS1Q8N1H7 587 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 OVCA2Q8WZ82 227 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 TCEAL4Q96EI5 215 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 PANX2Q96RD6 677 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 CHP1Q99653 195 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ULBP1Q9BZM6 244 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 TJP2Q9UDY2 1190 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ADAMTS1Q9UHI8 967 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 UNC80Q8N2C7 3258 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 NCANO14594 1321 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 NOTCH4Q99466 2003 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 PATJQ8NI35 1801 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 C2orf16Q68DN1 1984 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 SSU72P8A0A1W2PR75 194 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 A0A1W2PRU2 124 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 PIK3R2O00459 728 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 USP17L7P0C7H9 530 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ZDHHC11BP0C7U3 371 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 GABRB2P47870 512 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 PPP3CCP48454 512 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 VPS36Q86VN1 386 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 SCUBE3Q8IX30 993 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 PDZD8Q8NEN9 1154 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ITFG1Q8TB96 612 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 SHKBP1Q8TBC3 707 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ATXN3LQ9H3M9 355 aa17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 MRPS23Q9Y3D9 190 aaKnown RBP17.49■□□□□ 0.39
CHCHD3-201ENST00000262570 ZNF840PA6NDX5 716 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 GOLGA6L6A8MZA4 724 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 PAPSS1O43252 624 aaPredicted RBP17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 FBXO21O94952 628 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 GZMAP12544 262 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 GJA1P17302 382 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 MMP8P22894 467 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 FSHRP23945 695 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 EIF4A3P38919 411 aaKnown RBP17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 NSFP46459 744 aaKnown RBP17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 SNX16P57768 344 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 DAOAP59103 153 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 SMAD2Q15796 467 aaKnown RBP17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 ASTE1Q2TB18 679 aaPredicted RBP17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 PUS10Q3MIT2 529 aaKnown RBP17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 SNX30Q5VWJ9 437 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 BHLHA9Q7RTU4 235 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 MON1AQ86VX9 555 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 ERICH1Q86X53 443 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 C18orf8Q96DM3 657 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 TAS2R14Q9NYV8 317 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 TRPM5Q9NZQ8 1165 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 GMIPQ9P107 970 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 THEGQ9P2T0 379 aa17.48■□□□□ 0.39
CHCHD3-201ENST00000262570 A0A087X0T9 212 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 FAM170AA1A519 330 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 ERBB2P04626 1255 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 FAM228BP0C875 321 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 FECHP22830 423 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 PGFP49763 221 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 MRPS5P82675 430 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 PTCRAQ6ISU1 281 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 ACAD10Q6JQN1 1059 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 PHF13Q86YI8 300 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 MSANTD4Q8NCY6 345 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 IPO4Q8TEX9 1081 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 CLEC4CQ8WTT0 213 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 IRGQQ8WZA9 623 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 NDRG1Q92597 394 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 ANP32BQ92688 251 aaKnown RBP17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 MIS12Q9H081 205 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 NHEJ1Q9H9Q4 299 aaPredicted RBP17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 NMUR1Q9HB89 426 aa17.47■□□□□ 0.39
CHCHD3-201ENST00000262570 GSDMDP57764 484 aa17.46■□□□□ 0.39
CHCHD3-201ENST00000262570 PTP4A2Q12974 167 aa17.46■□□□□ 0.39
CHCHD3-201ENST00000262570 TEAD2Q15562 447 aa17.46■□□□□ 0.39
CHCHD3-201ENST00000262570 C2CD6Q53TS8 623 aa17.46■□□□□ 0.39
CHCHD3-201ENST00000262570 PPP1R2P3Q6NXS1 205 aa17.46■□□□□ 0.39
CHCHD3-201ENST00000262570 SCD5Q86SK9 330 aa17.46■□□□□ 0.39
CHCHD3-201ENST00000262570 GCNAQ96QF7 691 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms