RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 TGDSO95455 350 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 LDHAP00338 332 aaKnown RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 RTP1P59025 263 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 UBAP2LQ14157 1087 aaKnown RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 HSF5Q4G112 596 aaPredicted RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 SH3PXD2AQ5TCZ1 1133 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 GBP5Q96PP8 586 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 NIF3L1Q9GZT8 377 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 KRT19P08727 400 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 RXRBP28702 533 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 MIPP30301 263 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 ROR1Q01973 937 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 SLC18A2Q05940 514 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 SMAD1Q15797 465 aaKnown RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 ZC3H12AQ5D1E8 599 aaKnown RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 XKR3Q5GH77 459 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 C1orf146Q5VVC0 180 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 CDR2LQ86X02 465 aaPredicted RBP18.19■□□□□ 0.5
TRAM1-201ENST00000262213 E2F7Q96AV8 911 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 GPRASP2Q96D09 838 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 PANX3Q96QZ0 392 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 PCMTD2Q9NV79 361 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 WDR35Q9P2L0 1181 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 ZNF212Q9UDV6 495 aa18.19■□□□□ 0.5
TRAM1-201ENST00000262213 ZNF646O15015 1829 aaPredicted RBP18.18■□□□□ 0.5
TRAM1-201ENST00000262213 MAGEA13PA6NCF6 341 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 ANPEPP15144 967 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 RAB27AP51159 221 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 CDH8P55286 799 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 TAP1Q03518 808 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 CDO1Q16878 200 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 SNRNP48Q6IEG0 339 aaKnown RBP18.18■□□□□ 0.5
TRAM1-201ENST00000262213 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 UBR7Q8N806 425 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.18■□□□□ 0.5
TRAM1-201ENST00000262213 CPXM1Q96SM3 734 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 PHACTR1Q9C0D0 580 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 CNTN3Q9P232 1028 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 ANGPTL2Q9UKU9 493 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 ARID2Q68CP9 1835 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 ROR2Q01974 943 aaKnown RBP18.18■□□□□ 0.5
TRAM1-201ENST00000262213 ENPEPQ07075 957 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 ZNF699Q32M78 642 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 SH2D5Q6ZV89 423 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 POLNQ7Z5Q5 900 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 TMPRSS6Q8IU80 811 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 NUDCD3Q8IVD9 361 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 NIPA2Q8N8Q9 360 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 SMYD3Q9H7B4 428 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 TEX264Q9Y6I9 313 aa18.18■□□□□ 0.5
TRAM1-201ENST00000262213 TNS1Q9HBL0 1735 aaKnown RBP18.17■□□□□ 0.5
TRAM1-201ENST00000262213 PRR5-ARHGAP8B1AHC4 643 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 SPECC1L-ADORA2AF8WAN1 911 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 APOC4-APOC2K7ER74 178 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 APOC2P02655 101 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 CDH6P55285 790 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 ARHGAP8P85298 464 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 SP2Q02086 613 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 TTC39BQ5VTQ0 682 aaPredicted RBP18.17■□□□□ 0.5
TRAM1-201ENST00000262213 SLC26A11Q86WA9 606 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 ULK2Q8IYT8 1036 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 GALNT15Q8N3T1 639 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 CCDC33Q8N5R6 958 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 SLC7A3Q8WY07 619 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 EBF4Q9BQW3 602 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 PORCNQ9H237 461 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 MMADHCQ9H3L0 296 aaPredicted RBP18.17■□□□□ 0.5
TRAM1-201ENST00000262213 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
TRAM1-201ENST00000262213 ZC3H7BQ9UGR2 993 aaKnown RBP18.17■□□□□ 0.5
TRAM1-201ENST00000262213 GHRHRQ02643 423 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 C6orf163Q5TEZ5 329 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 MROH9Q5TGP6 573 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 THNSL1Q8IYQ7 743 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 GATA6Q92908 595 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 SHCBP1LQ9BZQ2 653 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 C20orf27Q9GZN8 174 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 PPM1HQ9ULR3 514 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 HEY1Q9Y5J3 304 aa18.17■□□□□ 0.5
TRAM1-201ENST00000262213 ARHGAP42A6NI28 874 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 VWA5AO00534 786 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 TBC1D12O60347 775 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 GRAP2O75791 330 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 ERBB2P04626 1255 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 EIF4BP23588 611 aaKnown RBP18.16■□□□□ 0.5
TRAM1-201ENST00000262213 POLR2BP30876 1174 aaKnown RBP18.16■□□□□ 0.5
TRAM1-201ENST00000262213 NAMPTP43490 491 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 MFN1Q8IWA4 741 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 ZNF302Q9NR11 478 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.16■□□□□ 0.5
TRAM1-201ENST00000262213 NDE1Q9NXR1 346 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 SLC7A8Q9UHI5 535 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 MAD1L1Q9Y6D9 718 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 A8MXQ7 604 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 F5H423 210 aaPredicted RBP18.16■□□□□ 0.5
TRAM1-201ENST00000262213 KCNN4O15554 427 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 KRT37O76014 449 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 SUPT20HL2P0C7V6 817 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 SRGAP2CP0DJJ0 459 aa18.16■□□□□ 0.5
TRAM1-201ENST00000262213 YWHAZP63104 245 aaKnown RBP18.16■□□□□ 0.5
TRAM1-201ENST00000262213 MRPS5P82675 430 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms