RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 MT-CO1P00395 513 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 SH3D19Q5HYK7 790 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 CDR2LQ86X02 465 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 MOCOSQ96EN8 888 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 SCYL1Q96KG9 808 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 ARMC7Q9H6L4 198 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 TMEM8AQ9HCN3 771 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 SEPT9Q9UHD8 586 aaPredicted RBP16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 NENFQ9UMX5 172 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 ZHX2Q9Y6X8 837 aa16.53■□□□□ 0.24
PRPF40B-201ENST00000261897 CLRN2A0PK11 232 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 SIGLEC16A6NMB1 481 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 ZBBXA8MT70 800 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 CD48P09326 243 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 YWHABP31946 246 aaKnown RBP16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 SHMT1P34896 483 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 DPY19L2Q6NUT2 758 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 ANKRD23Q86SG2 305 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 ALLCQ8N6M5 410 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 LMO3Q8TAP4 145 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 DCUN1D1Q96GG9 259 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 SLITRK1Q96PX8 696 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 HSD17B14Q9BPX1 270 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 CEP41Q9BYV8 373 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 VAV3Q9UKW4 847 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 A0A0J9YVX5 310 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 SMARCA1P28370 1054 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 SREBF1P36956 1147 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 CDH15P55291 814 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 ESRRGP62508 458 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 MMRN1Q13201 1228 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 ITGA9Q13797 1035 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 FAM98CQ17RN3 349 aaKnown RBP16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 BMT2Q1RMZ1 405 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 PDPK2PQ6A1A2 396 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 CYP2R1Q6VVX0 501 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 TRIM50Q86XT4 487 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 IGDCC3Q8IVU1 814 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 CPT1BQ92523 772 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 ACSS3Q9H6R3 686 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 TUFT1Q9NNX1 390 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 PRR12Q9ULL5 1215 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 CCDC88AQ3V6T2 1871 aa16.52■□□□□ 0.24
PRPF40B-201ENST00000261897 KCPQ6ZWJ8 1503 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 STT3AP46977 705 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 ZNF786Q8N393 782 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 LINC00116Q8NCU8 138 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 SHOC2Q9UQ13 582 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 ATF5Q9Y2D1 282 aaPredicted RBP16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 SNX13Q9Y5W8 968 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 ZNF536O15090 1300 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 LAMB4A4D0S4 1761 aa16.52■□□□□ 0.23
PRPF40B-201ENST00000261897 MAGEB2O15479 319 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 ABHD2P08910 425 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 TYK2P29597 1187 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 FDFT1P37268 417 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 CLK2P49760 499 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 GPAT2Q6NUI2 795 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 FOXR2Q6PJQ5 311 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 SKA1Q96BD8 255 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 DHX35Q9H5Z1 703 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 SELENONQ9NZV5 590 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 MYH11P35749 1972 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 NOL3O60936 208 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 OATP04181 439 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 ROR1Q01973 937 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 GRAPQ13588 217 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 TNS4Q8IZW8 715 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 GRAPLQ8TC17 118 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 FAM172AQ8WUF8 416 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 TSPYL2Q9H2G4 693 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 MRPL46Q9H2W6 279 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 CCPG1Q9ULG6 757 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 PCDHGB4Q9UN71 923 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 ZNF232Q9UNY5 417 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 PCDHGB5Q9Y5G0 923 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 NR2E3Q9Y5X4 410 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 TRAFD1O14545 582 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 PSTPIP1O43586 416 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 TRMUO75648 421 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 IMPDH2P12268 514 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 CA8P35219 290 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 MLH1P40692 756 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 TSPY1Q01534 308 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 RNASEH2BQ5TBB1 312 aaKnown RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 TTC39BQ5VTQ0 682 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 VTI1AQ96AJ9 217 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 SYT11Q9BT88 431 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 V9GYQ6 96 aa16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 CICQ96RK0 1608 aaPredicted RBP16.51■□□□□ 0.23
PRPF40B-201ENST00000261897 A0A0B4J269 797 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 SMIM31A0A1B0GVY4 71 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 FAM58BPP0C7Q3 252 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 QARSP47897 775 aaKnown RBP16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 SPDYAQ5MJ70 313 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 TNS2Q63HR2 1409 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 CCNYL1Q8N7R7 359 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 ZFP28Q8NHY6 868 aa16.5■□□□□ 0.23
PRPF40B-201ENST00000261897 HELQQ8TDG4 1101 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms