RNA–Protein interactions for RNA: ENST00000261798.9

CSNK1A1-201, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 6,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-201ENST00000261798 CCDC28BQ9BUN5 200 aa11.19□□□□□ -0.62
CSNK1A1-201ENST00000261798 NDFIP2Q9NV92 336 aa11.19□□□□□ -0.62
CSNK1A1-201ENST00000261798 ATXN10Q9UBB4 475 aa11.19□□□□□ -0.62
CSNK1A1-201ENST00000261798 FRMPD1Q5SYB0 1578 aa11.19□□□□□ -0.62
CSNK1A1-201ENST00000261798 ERCC6L2Q5T890 1561 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 TCRBV5S4A2TA0A5A2 114 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 KLRC4O43908 158 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 IL18RAPO95256 599 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ABHD2P08910 425 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 SREBF1P36956 1147 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 TSPY1Q01534 308 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 MMRN1Q13201 1228 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ITGA9Q13797 1035 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 N4BP2L1Q5TBK1 243 aaPredicted RBP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 CIAPIN1Q6FI81 312 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 PRELID2Q8N945 189 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 USP13Q92995 863 aaPredicted RBP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 CAB39Q9Y376 341 aaPredicted RBP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 C2CD2LO14523 706 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 GARTP22102 1010 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 PRKAA1Q13131 559 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 LRRC55Q6ZSA7 311 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 SCN4BQ8IWT1 228 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 RMDN1Q96DB5 314 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 CYLDQ9NQC7 956 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 UBE3AQ05086 875 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 MGAT5Q09328 741 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 CSTF3Q12996 717 aaKnown RBP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 TMEM132DQ14C87 1099 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 PDK3Q15120 406 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 SV2AQ7L0J3 742 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 TAS2R42Q7RTR8 314 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DHDDSQ86SQ9 333 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 USP33Q8TEY7 942 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 NDEL1Q9GZM8 345 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ZMYND8Q9ULU4 1186 aaPredicted RBP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ZNF263O14978 683 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 MAFGO15525 162 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 PYGLP06737 847 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 CYP2C8P10632 490 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ANPEPP15144 967 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 PRKCEQ02156 737 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 LAMC2Q13753 1193 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 SPDYAQ5MJ70 313 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 RRM2BQ7LG56 351 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 RDM1Q8NG50 284 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ART4Q93070 314 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 SH3GL1Q99961 368 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 OSBPL7Q9BZF2 842 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 RIOX1Q9H6W3 641 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 SLIT1O75093 1534 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 A0A1B0GW55 424 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 KBTBD13C9JR72 458 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 AGPSO00116 658 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 TNPO2O14787 897 aaKnown RBP11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 NR3C2P08235 984 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DUX4L2P0CJ85 424 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DUX4L3P0CJ86 424 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DUX4L4P0CJ87 422 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DUX4L5P0CJ88 424 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DUX4L6P0CJ89 424 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DUX4L7P0CJ90 424 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 FGFR2P21802 821 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 RAD23AP54725 363 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ARPP19P56211 112 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 FAAP100Q0VG06 881 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 TTC27Q6P3X3 843 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ABRAQ8N0Z2 381 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 HES6Q96HZ4 224 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 CDRT15Q96T59 188 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 DUX4Q9UBX2 424 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 ACOT9Q9Y305 439 aa11.18□□□□□ -0.62
CSNK1A1-201ENST00000261798 RNF225M0QZC1 329 aaPredicted RBP11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 ZNF197O14709 1029 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 DCXO43602 365 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 TRIM13O60858 407 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 SPP2Q13103 211 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 AGKQ53H12 422 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 TWF2Q6IBS0 349 aaKnown RBP11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 UBA3Q8TBC4 463 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 NMRK1Q9NWW6 199 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 EVPLLA8MZ36 301 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 DNM1LO00429 736 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 MGRN1O60291 552 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 CLASP2O75122 1294 aaKnown RBP11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 NDUFS3O75489 264 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 SMNDC1O75940 238 aaKnown RBP eCLIP11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 PGM3O95394 542 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 CCNHP51946 323 aaPredicted RBP11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 BTBD8Q5XKL5 378 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 CWF19L1Q69YN2 538 aaKnown RBP11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 SZRD1Q7Z422 152 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 STX19Q8N4C7 294 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 IPMKQ8NFU5 416 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 DIS3LQ8TF46 1054 aaKnown RBP11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 CNPY3Q9BT09 278 aa11.17□□□□□ -0.62
CSNK1A1-201ENST00000261798 RRN3Q9NYV6 651 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms