RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 IRX5P78411 483 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 CLEC16AQ2KHT3 1053 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 FBXO47Q5MNV8 452 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 TMTC4Q5T4D3 741 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 GALNT18Q6P9A2 607 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 MAP4K3Q8IVH8 894 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 PPM1NQ8N819 430 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 SYTL5Q8TDW5 730 aaPredicted RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 ELP3Q9H9T3 547 aa4.47□□□□□ -1.69
VPS13C-202ENST00000261517 XPO7Q9UIA9 1087 aaKnown RBP4.47□□□□□ -1.69
VPS13C-202ENST00000261517 KRT87PA6NCN2 255 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 TCEA2Q15560 299 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 SLC45A4Q5BKX6 768 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 ZNF438Q7Z4V0 828 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 ADGRF2Q8IZF7 708 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 WDCPQ9H6R7 721 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 ENTPD7Q9NQZ7 604 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 F8VZ95 297 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 KCNQ2O43526 872 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 C6orf222P0C671 652 aaPredicted RBP4.46□□□□□ -1.69
VPS13C-202ENST00000261517 KRT20P35900 424 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 MRPS35P82673 323 aaKnown RBP4.46□□□□□ -1.69
VPS13C-202ENST00000261517 PLOD1Q02809 727 aaPredicted RBP4.46□□□□□ -1.69
VPS13C-202ENST00000261517 NTRK3Q16288 839 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 GOLGA7BQ2TAP0 167 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 CYP4Z1Q86W10 505 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 GAS2L3Q86XJ1 694 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 TC2NQ8N9U0 490 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 SLC44A5Q8NCS7 719 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 OR6P1Q8NGX9 317 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 SH3KBP1Q96B97 665 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 OSBPL1AQ9BXW6 950 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 AP4S1Q9Y587 144 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 SLC4A7Q9Y6M7 1214 aa4.46□□□□□ -1.69
VPS13C-202ENST00000261517 HNRNPCL2B2RXH8 293 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PDE2AO00408 941 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 E2F6O75461 281 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ALDH1A2O94788 518 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 DNAJB1P25685 340 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 HNRNPH3P31942 346 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 HIRAP54198 1017 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GPAT2Q6NUI2 795 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TTC16Q8NEE8 873 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 REPS2Q8NFH8 660 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MRRFQ96E11 262 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CEP19Q96LK0 163 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PORCNQ9H237 461 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 RGL1Q9NZL6 768 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PDP2Q9P2J9 529 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 POLG2Q9UHN1 485 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ATF5Q9Y2D1 282 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ZDHHC9Q9Y397 364 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PCDHB5Q9Y5E4 795 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SNX9Q9Y5X1 595 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 FAM47E-STBD1D6RA91 191 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 THRAP10827 490 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MAGEA4P43358 317 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 RBBP7Q16576 425 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GNASQ5JWF2 1037 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 DLG3Q92796 817 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PRDM10Q9NQV6 1147 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 KLHL11Q9NVR0 708 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 NCKIPSDQ9NZQ3 722 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TNFSF13BQ9Y275 285 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 FAM95CA0A1B0GW59 222 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 HEATR9A2RTY3 570 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM114B3SHH9 223 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CHADO15335 359 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MEFVO15553 781 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SORBS3O60504 671 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CXCR2P25025 360 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CCZ1BP86790 482 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CCZ1P86791 482 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 VGLL2Q8N8G2 317 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM176AQ96HP8 235 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GIT1Q9Y2X7 761 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 LTBP3Q9NS15 1303 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GYPCP04921 128 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 GSNP06396 782 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CCDC130P13994 396 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CDH18Q13634 790 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 PGM5Q15124 567 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 MYO1HQ8N1T3 1032 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 AIFM3Q96NN9 605 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TRMT6Q9UJA5 497 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SYNJ2BP-COX16A0A087WUM0 186 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ARHGEF9O43307 516 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CYP1A1P04798 512 aaPredicted RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 DPEP1P16444 411 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TTKP33981 857 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 SCNN1AP37088 669 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 NPTX2P47972 431 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 C16orf72Q14CZ0 275 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 CDO1Q16878 200 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 LEMD2Q8NC56 503 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 ATXN2LQ8WWM7 1075 aaKnown RBP4.46□□□□□ -1.7
VPS13C-202ENST00000261517 UNC45AQ9H3U1 944 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 TMEM260Q9NX78 707 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 COX16Q9P0S2 106 aa4.46□□□□□ -1.7
VPS13C-202ENST00000261517 OR6C75A6NL08 312 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms