RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SPATA18Q8TC71 538 aa23.42■■□□□ 1.34
SIX3-201ENST00000260653 DIS3LQ8TF46 1054 aaKnown RBP23.42■■□□□ 1.34
SIX3-201ENST00000260653 RUNDC3BQ96NL0 473 aa23.42■■□□□ 1.34
SIX3-201ENST00000260653 KANSL3Q9P2N6 904 aa23.42■■□□□ 1.34
SIX3-201ENST00000260653 PCDHB7Q9Y5E2 793 aa23.42■■□□□ 1.34
SIX3-201ENST00000260653 KDELR1P24390 212 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 INTS6LQ5JSJ4 861 aaKnown RBP23.41■■□□□ 1.34
SIX3-201ENST00000260653 EIF1ADQ8N9N8 165 aaKnown RBP23.41■■□□□ 1.34
SIX3-201ENST00000260653 ZMIZ2Q8NF64 920 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 KCTD13Q8WZ19 329 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 ADAM33Q9BZ11 813 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 CRISPLD2Q9H0B8 497 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 ELAC1Q9H777 363 aaKnown RBP23.41■■□□□ 1.34
SIX3-201ENST00000260653 LRRC4Q9HBW1 653 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 HPCAL4Q9UM19 191 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 TJP3O95049 919 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 ECEL1O95672 775 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 COL6A1P12109 1028 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 PAX3P23760 479 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 TLE2Q04725 743 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 ABI1Q8IZP0 508 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 FAM114A2Q9NRY5 505 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 TMLHEQ9NVH6 421 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 SNX24Q9Y343 169 aa23.41■■□□□ 1.34
SIX3-201ENST00000260653 PRPSAP2O60256 369 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 SCYL2Q6P3W7 929 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 FAM171BQ6P995 826 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 KRT222Q8N1A0 295 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 CMASQ8NFW8 434 aaPredicted RBP23.4■■□□□ 1.34
SIX3-201ENST00000260653 FAM193BQ96PV7 902 aaPredicted RBP23.4■■□□□ 1.34
SIX3-201ENST00000260653 CAPN15O75808 1086 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 CYP2C18P33260 490 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 HDAC4P56524 1084 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 CCNG2Q16589 344 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 GPRIN1Q7Z2K8 1008 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 KCTD6Q8NC69 237 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 TSEN2Q8NCE0 465 aaKnown RBP23.4■■□□□ 1.34
SIX3-201ENST00000260653 APBB2Q92870 758 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 SLCO2A1Q92959 643 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 FAM149B1Q96BN6 582 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 PKMYT1Q99640 499 aa23.4■■□□□ 1.34
SIX3-201ENST00000260653 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.4■■□□□ 1.34
SIX3-201ENST00000260653 DCDC2CA8MYV0 355 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 TYMPP19971 482 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 PTPN9P43378 593 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 TKTL1P51854 596 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 MRPS5P82675 430 aaKnown RBP23.39■■□□□ 1.34
SIX3-201ENST00000260653 NNTQ13423 1086 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 LRRTM3Q86VH5 581 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 SIX6OS1Q8N1H7 587 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 HAUS1Q96CS2 278 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 SMARCD1Q96GM5 515 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 ZNF333Q96JL9 665 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 C11orf84Q9BUA3 381 aaPredicted RBP23.39■■□□□ 1.34
SIX3-201ENST00000260653 HOMER3Q9NSC5 361 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 PCDHB8Q9UN66 801 aa23.39■■□□□ 1.34
SIX3-201ENST00000260653 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.39■■□□□ 1.33
SIX3-201ENST00000260653 RPL21P46778 160 aaKnown RBP23.39■■□□□ 1.33
SIX3-201ENST00000260653 KRT17Q04695 432 aa23.39■■□□□ 1.33
SIX3-201ENST00000260653 PPP1R7Q15435 360 aa23.39■■□□□ 1.33
SIX3-201ENST00000260653 EFHC1Q5JVL4 640 aa23.39■■□□□ 1.33
SIX3-201ENST00000260653 ARCQ7LC44 396 aa23.39■■□□□ 1.33
SIX3-201ENST00000260653 CCDC114Q96M63 670 aa23.39■■□□□ 1.33
SIX3-201ENST00000260653 CASD1Q96PB1 797 aa23.39■■□□□ 1.33
SIX3-201ENST00000260653 HCSTQ9UBK5 93 aa23.39■■□□□ 1.33
SIX3-201ENST00000260653 KIAA0100Q14667 2235 aaKnown RBP23.39■■□□□ 1.33
SIX3-201ENST00000260653 TMEM189-UBE2V1I3L0A0 370 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 ATXN1P54253 815 aaKnown RBP23.38■■□□□ 1.33
SIX3-201ENST00000260653 DYNLT1P63172 113 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 YWHAHQ04917 246 aaPredicted RBP23.38■■□□□ 1.33
SIX3-201ENST00000260653 TAZQ16635 292 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 DEFB128Q7Z7B8 93 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.38■■□□□ 1.33
SIX3-201ENST00000260653 VIPAS39Q9H9C1 493 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 HSF2BPO75031 334 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 BCAR1P56945 870 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 THEM5Q8N1Q8 247 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 DDX23Q9BUQ8 820 aaKnown RBP23.38■■□□□ 1.33
SIX3-201ENST00000260653 CALN1Q9BXU9 219 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 GPATCH2LQ9NWQ4 482 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.38■■□□□ 1.33
SIX3-201ENST00000260653 LRFN2Q9ULH4 789 aa23.38■■□□□ 1.33
SIX3-201ENST00000260653 ARHGEF37A1IGU5 675 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 BDNFP23560 247 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 ULBP1Q9BZM6 244 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 NRDE2Q9H7Z3 1164 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 GRHL1Q9NZI5 618 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 CXCL10P02778 98 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 DESP17661 470 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 DRG2P55039 364 aaKnown RBP23.37■■□□□ 1.33
SIX3-201ENST00000260653 CDH6P55285 790 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 CBX1P83916 185 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 CTU1Q7Z7A3 348 aaKnown RBP23.37■■□□□ 1.33
SIX3-201ENST00000260653 DEFB106AQ8N104 65 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 CRIPAKQ8N1N5 446 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 ATL2Q8NHH9 583 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 CENPIQ92674 756 aaPredicted RBP23.37■■□□□ 1.33
SIX3-201ENST00000260653 DNPEPQ9ULA0 475 aa23.37■■□□□ 1.33
SIX3-201ENST00000260653 PTPRDP23468 1912 aa23.36■■□□□ 1.33
SIX3-201ENST00000260653 HHLA1C9JL84 531 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms