RNA–Protein interactions for RNA: ENST00000242285.10

CLTA-201, Transcript of clathrin light chain A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLTA, Length 1,152 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-201ENST00000242285 PDGFRLQ15198 375 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 ITPRIPL2Q3MIP1 535 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 CC2D1AQ6P1N0 951 aaPredicted RBP17.72■□□□□ 0.43
CLTA-201ENST00000242285 CLEC20AQ6ZU45 233 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 ARL14EPQ8N8R7 260 aaPredicted RBP17.72■□□□□ 0.43
CLTA-201ENST00000242285 ATRIPQ8WXE1 791 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 TATDN2Q93075 761 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 FBXO32Q969P5 355 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 SRRTQ9BXP5 876 aaKnown RBP17.72■□□□□ 0.43
CLTA-201ENST00000242285 EPC1Q9H2F5 836 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 TRPC7Q9HCX4 862 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.72■□□□□ 0.43
CLTA-201ENST00000242285 LMBRD1Q9NUN5 540 aa17.72■□□□□ 0.43
CLTA-201ENST00000242285 BEST1O76090 585 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 CD72P21854 359 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 SDHBP21912 280 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 RAD23BP54727 409 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 NRLP54845 237 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 STX17P56962 302 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 PUM1Q14671 1186 aaKnown RBP eCLIP17.71■□□□□ 0.435e-8■■□□□ 12.9
CLTA-201ENST00000242285 MTF1Q14872 753 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 ARHGAP17Q68EM7 881 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 SMYD5Q6GMV2 418 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 UBR7Q8N806 425 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 SLC4A11Q8NBS3 891 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 LMO3Q8TAP4 145 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 RIN3Q8TB24 985 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 OSCP1Q8WVF1 389 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 SECISBP2LQ93073 1101 aaKnown RBP17.71■□□□□ 0.43
CLTA-201ENST00000242285 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 NT5C1BQ96P26 610 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 IPO9Q96P70 1041 aaKnown RBP17.71■□□□□ 0.43
CLTA-201ENST00000242285 CYP2S1Q96SQ9 504 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 ARID3AQ99856 593 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 HINFPQ9BQA5 517 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 DUSP16Q9BY84 665 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 UBXN6Q9BZV1 441 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 NUP62CLQ9H1M0 184 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 CHRDQ9H2X0 955 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 GKN1Q9NS71 199 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 GTSE1Q9NYZ3 720 aa17.71■□□□□ 0.43
CLTA-201ENST00000242285 WDR87Q6ZQQ6 2873 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 FRYLO94915 3013 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 OTOGLQ3ZCN5 2332 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 HHLA1C9JL84 531 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 SPECC1L-ADORA2AF8WAN1 911 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 KPNA1P52294 538 aaPredicted RBP17.7■□□□□ 0.42
CLTA-201ENST00000242285 MAP3K7CLP57077 242 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 AMPD2Q01433 879 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 CSTF1Q05048 431 aaKnown RBP17.7■□□□□ 0.42
CLTA-201ENST00000242285 KCNH2Q12809 1159 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 RUNX3Q13761 415 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 CT47A1Q5JQC4 288 aaPredicted RBP17.7■□□□□ 0.42
CLTA-201ENST00000242285 PPP1R26Q5T8A7 1209 aaPredicted RBP17.7■□□□□ 0.42
CLTA-201ENST00000242285 DDX42Q86XP3 938 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLTA-201ENST00000242285 SCAMP5Q8TAC9 235 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 ZFYVE19Q96K21 471 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 HPS4Q9NQG7 708 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 DLL3Q9NYJ7 618 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 SCML2Q9UQR0 700 aa17.7■□□□□ 0.42
CLTA-201ENST00000242285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
CLTA-201ENST00000242285 EP300Q09472 2414 aaPredicted RBP17.69■□□□□ 0.42
CLTA-201ENST00000242285 AFPP02771 609 aaKnown RBP17.69■□□□□ 0.42
CLTA-201ENST00000242285 ADORA2BP29275 332 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 GCNT1Q02742 428 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 DGKKQ5KSL6 1271 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 HECTD3Q5T447 861 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 KIAA2013Q8IYS2 634 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 SYNPOQ8N3V7 929 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 ZNF276Q8N554 614 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 SH3RF2Q8TEC5 729 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 ATP2A3Q93084 1043 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 RMDN1Q96DB5 314 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 HEXIM2Q96MH2 286 aaKnown RBP17.69■□□□□ 0.42
CLTA-201ENST00000242285 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 DACH1Q9UI36 760 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 KIAA1257Q9ULG3 409 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 DMXL1Q9Y485 3027 aa17.69■□□□□ 0.42
CLTA-201ENST00000242285 CHRNB1P11230 501 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 PRKCSHP14314 528 aaPredicted RBP17.68■□□□□ 0.42
CLTA-201ENST00000242285 ERCC5P28715 1186 aaPredicted RBP17.68■□□□□ 0.42
CLTA-201ENST00000242285 PSEN1P49768 467 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 CCR3P51677 355 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 KIF11P52732 1056 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 TNK2Q07912 1038 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 DNAH14Q0VDD8 3507 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 LRRC32Q14392 662 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 ZNF394Q53GI3 561 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 ANKRD52Q8NB46 1076 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 JAKMIP2Q96AA8 810 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 MED15Q96RN5 788 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 CYLDQ9NQC7 956 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 TLR8Q9NR97 1041 aaKnown RBP17.68■□□□□ 0.42
CLTA-201ENST00000242285 DUS2Q9NX74 493 aaKnown RBP17.68■□□□□ 0.42
CLTA-201ENST00000242285 USP3Q9Y6I4 520 aa17.68■□□□□ 0.42
CLTA-201ENST00000242285 GOLGA6L22H0YM25 854 aa17.67■□□□□ 0.42
CLTA-201ENST00000242285 LEFTY2O00292 366 aa17.67■□□□□ 0.42
CLTA-201ENST00000242285 SLC9A3R1O14745 358 aaPredicted RBP17.67■□□□□ 0.42
CLTA-201ENST00000242285 PAEPP09466 180 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms