RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 TSSK1BQ9BXA7 367 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 TRIM55Q9BYV6 548 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 TRIM6Q9C030 488 aaPredicted RBP16.21■□□□□ 0.19
CTSD-201ENST00000236671 ASCC2Q9H1I8 757 aaPredicted RBP16.21■□□□□ 0.19
CTSD-201ENST00000236671 PCSK1NQ9UHG2 260 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 THSD7BQ9C0I4 1608 aa16.21■□□□□ 0.19
CTSD-201ENST00000236671 A0A0G2JND7 137 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 TCRBV9S1A1TA0A576 114 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 C19orf81C9J6K1 198 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 LUC7L3O95232 432 aaKnown RBP16.21■□□□□ 0.18
CTSD-201ENST00000236671 MT-ND3P03897 115 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 RBP3P10745 1247 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 STAT5BP51692 787 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 PTK7Q13308 1070 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 SLC44A1Q8WWI5 657 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 HSPH1Q92598 858 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 CADM1Q9BY67 442 aaKnown RBP16.21■□□□□ 0.18
CTSD-201ENST00000236671 KCNK13Q9HB14 408 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 HEY2Q9UBP5 337 aa16.21■□□□□ 0.18
CTSD-201ENST00000236671 NXF1Q9UBU9 619 aaKnown RBP16.21■□□□□ 0.18
CTSD-201ENST00000236671 IQANK1A0A1B0GTG1 560 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 MANSC4A6NHS7 340 aaPredicted RBP16.2■□□□□ 0.18
CTSD-201ENST00000236671 KBTBD13C9JR72 458 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 MED7O43513 233 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 HAUS5O94927 633 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 SRGAP2CP0DJJ0 459 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 PROZP22891 400 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 SLC18A2Q05940 514 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 LAMTOR4Q0VGL1 99 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 RFWD3Q6PCD5 774 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.2■□□□□ 0.183e-6■■■■■ 69.6
CTSD-201ENST00000236671 SPATA18Q8TC71 538 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 SKA1Q96BD8 255 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 BCO2Q9BYV7 579 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 TXNRD2Q9NNW7 524 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 ARL8BQ9NVJ2 186 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 WDR35Q9P2L0 1181 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 TEX264Q9Y6I9 313 aa16.2■□□□□ 0.18
CTSD-201ENST00000236671 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.19■□□□□ 0.18
CTSD-201ENST00000236671 DNAJC6O75061 913 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 TGDSO95455 350 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 TRUB2O95900 331 aaKnown RBP16.19■□□□□ 0.18
CTSD-201ENST00000236671 TNNC2P02585 160 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 CAP1Q01518 475 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 CRHR2Q13324 411 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 ORC1Q13415 861 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 KCNJ11Q14654 390 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 PRKD1Q15139 912 aaPredicted RBP16.19■□□□□ 0.18
CTSD-201ENST00000236671 KBTBD12Q3ZCT8 623 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 CMPK2Q5EBM0 449 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 FAM160B1Q5W0V3 765 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 C4orf50Q6ZRC1 276 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 RNF149Q8NC42 400 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 PRR11Q96HE9 360 aaPredicted RBP16.19■□□□□ 0.18
CTSD-201ENST00000236671 PEBP4Q96S96 227 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 CALN1Q9BXU9 219 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 SDCBP2Q9H190 292 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 CNTN3Q9P232 1028 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 USP18Q9UMW8 372 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 H0Y3Z8 333 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 B4GALT4O60513 344 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 TCF7P36402 384 aaPredicted RBP16.19■□□□□ 0.18
CTSD-201ENST00000236671 TM4SF4P48230 202 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 ARFIP2P53365 341 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 CDH8P55286 799 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 ZNF200P98182 395 aaPredicted RBP16.19■□□□□ 0.18
CTSD-201ENST00000236671 CDK16Q00536 496 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 NOMO1Q15155 1222 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 IER5Q5VY09 327 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 NPNTQ6UXI9 565 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 MCRS1Q96EZ8 462 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 ANKRD36BP1Q96IX9 119 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 FAM111AQ96PZ2 611 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 TWNKQ96RR1 684 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 FAM167BQ9BTA0 163 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 TMEM120AQ9BXJ8 343 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 SYNCQ9H7C4 482 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 RSAD1Q9HA92 442 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 PTPRHQ9HD43 1115 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 FBXO6Q9NRD1 293 aaPredicted RBP16.19■□□□□ 0.18
CTSD-201ENST00000236671 HMGXB4Q9UGU5 601 aa16.19■□□□□ 0.18
CTSD-201ENST00000236671 CFAP69A5D8W1 941 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 CCDC22O60826 627 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 SKAP2O75563 359 aaPredicted RBP16.18■□□□□ 0.18
CTSD-201ENST00000236671 IL1BP01584 269 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 C1QAP02745 245 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 DLDP09622 509 aaKnown RBP16.18■□□□□ 0.18
CTSD-201ENST00000236671 PYGBP11216 843 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 SERPINB3P29508 390 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 PTDSS1P48651 473 aaKnown RBP16.18■□□□□ 0.18
CTSD-201ENST00000236671 OSTNP61366 133 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 ROR1Q01973 937 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 MMRN1Q13201 1228 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 TAF1CQ15572 869 aaPredicted RBP16.18■□□□□ 0.18
CTSD-201ENST00000236671 MPZL3Q6UWV2 235 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 FASTKD5Q7L8L6 764 aaKnown RBP16.18■□□□□ 0.18
CTSD-201ENST00000236671 ZBTB8OSQ8IWT0 167 aa16.18■□□□□ 0.18
CTSD-201ENST00000236671 CEP120Q8N960 986 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms