RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CD4P01730 458 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 GSTA2P09210 222 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 CA4P22748 312 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 EPHB2P29323 1055 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 TAS2R40P59535 323 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 NFX1Q12986 1120 aaKnown RBP21.48■■□□□ 1.03
SNX3-201ENST00000230085 MAMLD1Q13495 774 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 SLC1A5Q15758 541 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 HHATQ5VTY9 493 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 CHSY1Q86X52 802 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 PTCD3Q96EY7 689 aaKnown RBP21.48■■□□□ 1.03
SNX3-201ENST00000230085 IFT43Q96FT9 208 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 ZMYND8Q9ULU4 1186 aaPredicted RBP21.48■■□□□ 1.03
SNX3-201ENST00000230085 ALPK3Q96L96 1907 aa21.48■■□□□ 1.03
SNX3-201ENST00000230085 COL1A2P08123 1366 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 SIP14410 1827 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 MBLAC1A4D2B0 266 aaPredicted RBP21.47■■□□□ 1.03
SNX3-201ENST00000230085 E7ESA3 106 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 NEFHP12036 1026 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 NOMO3P69849 1222 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 FAAP100Q0VG06 881 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 ADGRD1Q6QNK2 874 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 MTHFD1LQ6UB35 978 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 MFN1Q8IWA4 741 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNX3-201ENST00000230085 MZB1Q8WU39 189 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 TOX2Q96NM4 488 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 CCDC28BQ9BUN5 200 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 KIF9Q9HAQ2 790 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 IP6K2Q9UHH9 426 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 NOD1Q9Y239 953 aa21.47■■□□□ 1.03
SNX3-201ENST00000230085 DPPA5A6NC42 116 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 SLC16A4O15374 487 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 CYP2C9P11712 490 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 PECAM1P16284 738 aaPredicted RBP21.46■■□□□ 1.03
SNX3-201ENST00000230085 KRT15P19012 456 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 PEX3P56589 373 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 GEMIN4P57678 1058 aaKnown RBP21.46■■□□□ 1.03
SNX3-201ENST00000230085 SLITRK1Q96PX8 696 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 BTBD10Q9BSF8 475 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 FARP1Q9Y4F1 1045 aaPredicted RBP21.46■■□□□ 1.03
SNX3-201ENST00000230085 SPAG7O75391 227 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 C22orf31O95567 290 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 DHRS4L1P0CG22 281 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 ACO1P21399 889 aaKnown RBP21.46■■□□□ 1.03
SNX3-201ENST00000230085 PHBP35232 272 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 VCPP55072 806 aaKnown RBP21.46■■□□□ 1.03
SNX3-201ENST00000230085 TAF1BQ53T94 588 aaPredicted RBP21.46■■□□□ 1.03
SNX3-201ENST00000230085 SLC39A4Q6P5W5 647 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 GPD1LQ8N335 351 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 SPOCK2Q92563 424 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 WNT8BQ93098 351 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 VCXQ9H320 206 aa21.46■■□□□ 1.03
SNX3-201ENST00000230085 NVLO15381 856 aaKnown RBP21.45■■□□□ 1.02
SNX3-201ENST00000230085 KRT5P13647 590 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 PCK1P35558 622 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 VPS41P49754 854 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 CDK18Q07002 472 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 KLHL38Q2WGJ6 581 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 ZACNQ401N2 412 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 SERINC5Q86VE9 423 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 KCNV2Q8TDN2 545 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 TRAPPC9Q96Q05 1148 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 MIPEPQ99797 713 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 HTATIP2Q9BUP3 242 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 ACSS3Q9H6R3 686 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 PARVAQ9NVD7 372 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 KANSL3Q9P2N6 904 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 RABGEF1Q9UJ41 708 aa21.45■■□□□ 1.02
SNX3-201ENST00000230085 MTO1Q9Y2Z2 717 aaKnown RBP21.45■■□□□ 1.02
SNX3-201ENST00000230085 GOLGA8IPA6NC78 632 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 GOLGA8JA6NMD2 632 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 A8MXQ7 604 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 TLR3O15455 904 aaKnown RBP21.44■■□□□ 1.02
SNX3-201ENST00000230085 NPTX2P47972 431 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 DMP1Q13316 513 aaPredicted RBP21.44■■□□□ 1.02
SNX3-201ENST00000230085 ZRSR2Q15696 482 aaKnown RBP21.44■■□□□ 1.02
SNX3-201ENST00000230085 EFCAB12Q6NXP0 572 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 LVRNQ6Q4G3 990 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 GSTA5Q7RTV2 222 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 LRRC71Q8N4P6 559 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 NIPA2Q8N8Q9 360 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 ATP11CQ8NB49 1132 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 FEZF2Q8TBJ5 459 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 SKA1Q96BD8 255 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 CCDC127Q96BQ5 260 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 HEMGNQ9BXL5 484 aa21.44■■□□□ 1.02
SNX3-201ENST00000230085 CADM1Q9BY67 442 aaKnown RBP21.44■■□□□ 1.02
SNX3-201ENST00000230085 DHX33Q9H6R0 707 aaKnown RBP21.44■■□□□ 1.02
SNX3-201ENST00000230085 H0YCG3 227 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 KLF11O14901 512 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 MAFO75444 373 aaPredicted RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 ATP5BP06576 529 aaKnown RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 FGFR1P11362 822 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 ARSEP51690 589 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 ROR2Q01974 943 aaKnown RBP21.43■■□□□ 1.02
SNX3-201ENST00000230085 PSMD6Q15008 389 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 GSTA3Q16772 222 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 SLC30A9Q6PML9 568 aa21.43■■□□□ 1.02
SNX3-201ENST00000230085 PRUNE1Q86TP1 453 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms