RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 C3orf70A6NLC5 250 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 CST8O60676 142 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ESRRAP11474 423 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 NR1H3Q13133 447 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ACAP1Q15027 740 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ACSBG2Q5FVE4 666 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 XKR3Q5GH77 459 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 NLRP9Q7RTR0 991 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLC35B2Q8TB61 432 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 NSUN6Q8TEA1 469 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 PYROXD1Q8WU10 500 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 PRR11Q96HE9 360 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZBED3Q96IU2 234 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 FOXP3Q9BZS1 431 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 PORCNQ9H237 461 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 MYOZ2Q9NPC6 264 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 CYLDQ9NQC7 956 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 CISHQ9NSE2 258 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 PSMC3IPQ9P2W1 217 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 FAF1Q9UNN5 650 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SMG5Q9UPR3 1016 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ADGRA2Q96PE1 1338 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 RLFQ13129 1914 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 DKC1O60832 514 aaKnown RBP eCLIP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 TRPA1O75762 1119 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 TMEM63AO94886 807 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ITGAVP06756 1048 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 GEMIN4P57678 1058 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 MAP7D1Q3KQU3 841 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 EFHC2Q5JST6 749 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 C6orf163Q5TEZ5 329 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 CCDC62Q6P9F0 684 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 RGS9BPQ6ZS82 235 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 CDR2LQ86X02 465 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 IGDCC3Q8IVU1 814 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 UNC45BQ8IWX7 931 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 HS6ST3Q8IZP7 471 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 UBR7Q8N806 425 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 FBXO36Q8NEA4 188 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 NKD2Q969F2 451 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 CCDC124Q96CT7 223 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 PAFAH2Q99487 392 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 TCHPQ9BT92 498 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SPATA16Q9BXB7 569 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ARMCX1Q9P291 453 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 CYTH4Q9UIA0 394 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF214Q9UL59 606 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 C2orf71A6NGG8 1288 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SPDYE16A6NNV3 312 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 DCTN3O75935 186 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ASS1P00966 412 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SUPT20HL2P0C7V6 817 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 TBXAS1P24557 533 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 RPL22P35268 128 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SLC34A1Q06495 639 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 MTA1Q13330 715 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 BBS9Q3SYG4 887 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 KBTBD12Q3ZCT8 623 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SUPT20HL1Q3ZLR7 823 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 FYB2Q5VWT5 728 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 RASSF3Q86WH2 238 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 LRRC6Q86X45 466 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF184Q99676 751 aaPredicted RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 DHX33Q9H6R0 707 aaKnown RBP9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 SMYD3Q9H7B4 428 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 PCDH9Q9HC56 1237 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 PCSK1NQ9UHG2 260 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF180Q9UJW8 692 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 AGTPBP1Q9UPW5 1226 aa9.8□□□□□ -0.84
HLA-DOA-201ENST00000229829 BOLA2-SMG1P6H3BVE0 249 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 MAFGO15525 162 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 HAUS5O94927 633 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 ARL2P36404 184 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 CCR3P51677 355 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 HMGCS2P54868 508 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 OSTNP61366 133 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 KDSRQ06136 332 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 ENPEPQ07075 957 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 CAPSQ13938 189 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 PARP6Q2NL67 630 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 LIN52Q52LA3 116 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 NBPF12Q5TAG4 269 aaPredicted RBP9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 DENND1BQ6P3S1 775 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 TRIM67Q6ZTA4 783 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 TTLL6Q8N841 843 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 MTMR14Q8NCE2 650 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 MZB1Q8WU39 189 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 WDR60Q8WVS4 1066 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 NRG4Q8WWG1 115 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 MIPEPQ99797 713 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 ZNF302Q9NR11 478 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 DOLKQ9UPQ8 538 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SHOC2Q9UQ13 582 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 SNCAIPQ9Y6H5 919 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 LRCH4O75427 683 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 STAMBPO95630 424 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 PGM1P36871 562 aa9.79□□□□□ -0.84
HLA-DOA-201ENST00000229829 RAP1GAPP47736 663 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms