RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 DHX37Q8IY37 1157 aaKnown RBP16.98■□□□□ 0.31
LTBR-201ENST00000228918 TSSK1BQ9BXA7 367 aa16.98■□□□□ 0.31
LTBR-201ENST00000228918 ZSWIM8A7E2V4 1837 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 LACTBL1A8MY62 500 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 CHADO15335 359 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 SPAG6O75602 509 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 HMGCRP04035 888 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 GPD1P21695 349 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 CALRP27797 417 aaKnown RBP16.97■□□□□ 0.31
LTBR-201ENST00000228918 CLCN3P51790 818 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 FAAP100Q0VG06 881 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 SH3PXD2AQ5TCZ1 1133 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 WDR78Q5VTH9 848 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 NAIF1Q69YI7 327 aaPredicted RBP16.97■□□□□ 0.31
LTBR-201ENST00000228918 JADE1Q6IE81 842 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 CNPY3Q9BT09 278 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 TRIM55Q9BYV6 548 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 VRTNQ9H8Y1 702 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 CYP3A43Q9HB55 503 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 SLC24A3Q9HC58 644 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 ALG13Q9NP73 1137 aaKnown RBP16.97■□□□□ 0.31
LTBR-201ENST00000228918 PPP2R3BQ9Y5P8 575 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 IKBKGQ9Y6K9 419 aa16.97■□□□□ 0.31
LTBR-201ENST00000228918 C2CD4BA6NLJ0 364 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 SOCS7O14512 581 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 INHBAP08476 426 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 IQCF3P0C7M6 154 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 VDRP11473 427 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 GNAZP19086 355 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 CALB2P22676 271 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 YWHAGP61981 247 aaKnown RBP eCLIP16.96■□□□□ 0.31
LTBR-201ENST00000228918 CBLBQ13191 982 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 TFDP2Q14188 446 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 RAB6CQ53S08 254 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 FAM47CQ5HY64 1035 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 WASHC2DQ5SRD0 308 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 LRRC6Q86X45 466 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 KIRREL3Q8IZU9 778 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 STK32AQ8WU08 396 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 ZBTB10Q96DT7 871 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 RAB6CQ9H0N0 254 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 ASCC2Q9H1I8 757 aaPredicted RBP16.96■□□□□ 0.31
LTBR-201ENST00000228918 BATF3Q9NR55 127 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 RPL26L1Q9UNX3 145 aaKnown RBP16.96■□□□□ 0.31
LTBR-201ENST00000228918 SRCAPQ6ZRS2 3230 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 LTBP3Q9NS15 1303 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 C1QAP02745 245 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 STAG3L1P0CL83 205 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 ATICP31939 592 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 VGLL4Q14135 290 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 BZW1Q7L1Q6 419 aaKnown RBP16.96■□□□□ 0.31
LTBR-201ENST00000228918 UBA3Q8TBC4 463 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 KCNV2Q8TDN2 545 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 RXFP2Q8WXD0 754 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 FAF2Q96CS3 445 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 FGD4Q96M96 766 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 ANKRD27Q96NW4 1050 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 FAM111AQ96PZ2 611 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 R3HDMLQ9H3Y0 253 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 PNPLA8Q9NP80 782 aa16.96■□□□□ 0.31
LTBR-201ENST00000228918 MCM3APO60318 1980 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 A0A0G2JND7 137 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 H7C0C1 242 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 USP2O75604 605 aaPredicted RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 TGDSO95455 350 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 TPBGLP0DKB5 382 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 ATP5OP48047 213 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 PRKD1Q15139 912 aaPredicted RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 C15orf59Q2T9L4 293 aaPredicted RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 SYCP2LQ5T4T6 812 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 EFCAB12Q6NXP0 572 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 ENDOVQ8N8Q3 282 aaKnown RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 PIWIL1Q96J94 861 aaKnown RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 RNF157Q96PX1 679 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 MIPEPQ99797 713 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 USP29Q9HBJ7 922 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 CNTN3Q9P232 1028 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 PAK5Q9P286 719 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 TTLL3Q9Y4R7 772 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 POLR2AP24928 1970 aaKnown RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 E7ENQ6 273 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 AVILO75366 819 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 HAUS5O94927 633 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 IL1BP01584 269 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 PYGBP11216 843 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 CYP3A5P20815 502 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 YWHAZP63104 245 aaKnown RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 FAM183BPQ6ZVS7 135 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 SH3TC2Q8TF17 1288 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 TTC17Q96AE7 1141 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 SKA1Q96BD8 255 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 RTP4Q96DX8 246 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 HEXIM2Q96MH2 286 aaKnown RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 SPATA33Q96N06 139 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 KCNK13Q9HB14 408 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 PRMT7Q9NVM4 692 aaPredicted RBP16.95■□□□□ 0.3
LTBR-201ENST00000228918 HEY2Q9UBP5 337 aa16.95■□□□□ 0.3
LTBR-201ENST00000228918 PAPPA2Q9BXP8 1791 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 OTOFQ9HC10 1997 aa16.94■□□□□ 0.3
LTBR-201ENST00000228918 PRPSAP2O60256 369 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms